RNA–Protein interactions for RNA: YLR151C

PCD1, Transcript of 8-oxo-dGTP diphosphatase, yeastyeast

Gene PCD1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCD1YLR151C MTC1P47018 478 aaKnown RBP17.77■□□□□ 0.44
PCD1YLR151C DRS1P32892 752 aaKnown RBP16.81■□□□□ 0.28
PCD1YLR151C FAP1P53971 965 aa15.83■□□□□ 0.12
PCD1YLR151C PRI1P10363 409 aa14.87□□□□□ -0.03
PCD1YLR151C PRY3P47033 881 aa14.87□□□□□ -0.03
PCD1YLR151C AAD16Q02895 342 aa14.76□□□□□ -0.05
PCD1YLR151C ISW2Q08773 1120 aa14.67□□□□□ -0.06
PCD1YLR151C DIP2Q12220 943 aaPredicted RBP14.67□□□□□ -0.06
PCD1YLR151C RPG1P38249 964 aaKnown RBP14.55□□□□□ -0.08
PCD1YLR151C AVT3P36062 692 aa14.17□□□□□ -0.14
PCD1YLR151C TSR3Q12094 313 aaKnown RBP14.12□□□□□ -0.15
PCD1YLR151C RSE1Q04693 1361 aaKnown RBP14.1□□□□□ -0.15
PCD1YLR151C BFR2Q06631 534 aaKnown RBP14.06□□□□□ -0.16
PCD1YLR151C YCK3P39962 524 aa14.05□□□□□ -0.16
PCD1YLR151C HAA1Q12753 694 aaKnown RBP13.9□□□□□ -0.18
PCD1YLR151C RPL17AP05740 184 aaKnown RBP13.68□□□□□ -0.22
PCD1YLR151C RPL17BP46990 184 aaKnown RBP13.68□□□□□ -0.22
PCD1YLR151C REB1P21538 810 aa13.58□□□□□ -0.24
PCD1YLR151C MRPL32P25348 183 aa13.51□□□□□ -0.25
PCD1YLR151C SPT21P35209 758 aa13.07□□□□□ -0.32
PCD1YLR151C YKR023WP36119 530 aaKnown RBP12.91□□□□□ -0.34
PCD1YLR151C CDC27P38042 758 aa12.91□□□□□ -0.34
PCD1YLR151C YGL015CP33199 130 aa12.88□□□□□ -0.35
PCD1YLR151C HOP09932 586 aa12.68□□□□□ -0.38
PCD1YLR151C RIM101P33400 625 aa12.66□□□□□ -0.38
PCD1YLR151C DCD1P06773 312 aa12.64□□□□□ -0.39
PCD1YLR151C TFC8Q12308 588 aa12.63□□□□□ -0.39
PCD1YLR151C MAP2P38174 421 aaKnown RBP12.48□□□□□ -0.41
PCD1YLR151C TFA1P36100 482 aa12.46□□□□□ -0.41
PCD1YLR151C UBP10P53874 792 aaPredicted RBP12.44□□□□□ -0.42
PCD1YLR151C OXP1P28273 1286 aa12.27□□□□□ -0.45
PCD1YLR151C SCY1P53009 804 aa12.27□□□□□ -0.45
PCD1YLR151C BCH2P36122 765 aa12.25□□□□□ -0.45
PCD1YLR151C SLX5P32828 619 aaKnown RBP12.07□□□□□ -0.48
PCD1YLR151C PTP3P40048 928 aa12.07□□□□□ -0.48
PCD1YLR151C YIL055CP40523 627 aaKnown RBP12.07□□□□□ -0.48
PCD1YLR151C YAH1Q12184 172 aaKnown RBP11.97□□□□□ -0.49
PCD1YLR151C EPS1P40557 701 aa11.95□□□□□ -0.5
PCD1YLR151C TIF4632P39936 914 aaKnown RBP11.94□□□□□ -0.5
PCD1YLR151C BDF1P35817 686 aa11.89□□□□□ -0.51
PCD1YLR151C TGL3P40308 642 aa11.88□□□□□ -0.51
PCD1YLR151C RSM7P47150 247 aa11.88□□□□□ -0.51
PCD1YLR151C AI2P03876 854 aa11.77□□□□□ -0.53
PCD1YLR151C BBC1P47068 1157 aa11.74□□□□□ -0.53
PCD1YLR151C YLR271WQ06152 274 aa11.74□□□□□ -0.53
PCD1YLR151C BUD31P25337 157 aaPredicted RBP11.72□□□□□ -0.53
PCD1YLR151C SSP1P38871 571 aa11.62□□□□□ -0.55
PCD1YLR151C PSD2P53037 1138 aaKnown RBP11.52□□□□□ -0.57
PCD1YLR151C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.51□□□□□ -0.57not detected
PCD1YLR151C UBP9P39967 754 aa11.45□□□□□ -0.58
PCD1YLR151C MST1P07236 462 aa11.4□□□□□ -0.58
PCD1YLR151C YOR238WQ08634 303 aa11.4□□□□□ -0.58
PCD1YLR151C MRM1P25270 412 aa11.38□□□□□ -0.59
PCD1YLR151C NSR1P27476 414 aaKnown RBP RIP-Chip data11.38□□□□□ -0.59not detected
PCD1YLR151C CST9Q06032 482 aa11.36□□□□□ -0.59
PCD1YLR151C YAP5P40574 245 aa11.35□□□□□ -0.59
PCD1YLR151C MGA2P40578 1113 aa11.31□□□□□ -0.6
PCD1YLR151C YBL029C-AQ3E756 94 aa11.25□□□□□ -0.61
PCD1YLR151C SIS1P25294 352 aaKnown RBP11.21□□□□□ -0.61
PCD1YLR151C PIB1Q06651 286 aa11.2□□□□□ -0.62
PCD1YLR151C WSC3Q12215 556 aa11.13□□□□□ -0.63
PCD1YLR151C VNX1P42839 908 aa11.12□□□□□ -0.63
PCD1YLR151C RTG3P38165 486 aa11.11□□□□□ -0.63
PCD1YLR151C VPS29P38759 282 aa11.1□□□□□ -0.63
PCD1YLR151C GTT3P39996 337 aa11.1□□□□□ -0.63
PCD1YLR151C RCR1P38212 213 aa11.08□□□□□ -0.64
PCD1YLR151C YMR1P47147 688 aaKnown RBP RIP-Chip data11.04□□□□□ -0.64not detected
PCD1YLR151C DBP1P24784 617 aaKnown RBP11.03□□□□□ -0.64
PCD1YLR151C YFR006WP43590 535 aa11.03□□□□□ -0.64
PCD1YLR151C SPP1Q03012 353 aa11.02□□□□□ -0.65
PCD1YLR151C STS1P38637 319 aa10.99□□□□□ -0.65
PCD1YLR151C TIF11P38912 153 aaKnown RBP10.92□□□□□ -0.66
PCD1YLR151C VMA1P17255 1071 aaKnown RBP10.87□□□□□ -0.67
PCD1YLR151C SET4P42948 560 aa10.84□□□□□ -0.67
PCD1YLR151C ULI1P43604 169 aa10.83□□□□□ -0.68
PCD1YLR151C YOL036WQ08206 761 aa10.83□□□□□ -0.68
PCD1YLR151C MSB4Q12317 492 aa10.79□□□□□ -0.68
PCD1YLR151C IOC2Q12072 812 aa10.78□□□□□ -0.68
PCD1YLR151C RAM2P29703 316 aa10.77□□□□□ -0.69
PCD1YLR151C LDB19Q12502 818 aa10.77□□□□□ -0.69
PCD1YLR151C SAM3Q08986 587 aa10.76□□□□□ -0.69
PCD1YLR151C EAP1P36041 632 aaKnown RBP10.72□□□□□ -0.69
PCD1YLR151C FKH1P40466 484 aa10.72□□□□□ -0.69
PCD1YLR151C AIR2Q12476 344 aaKnown RBP10.72□□□□□ -0.69
PCD1YLR151C TRP5P00931 707 aaKnown RBP10.7□□□□□ -0.7
PCD1YLR151C MAK11P20484 414 aaKnown RBP10.67□□□□□ -0.7
PCD1YLR151C GYP5Q12344 894 aa10.65□□□□□ -0.7
PCD1YLR151C MIF2P35201 549 aa10.64□□□□□ -0.71
PCD1YLR151C RTG1P32607 177 aa10.61□□□□□ -0.71
PCD1YLR151C YJL171CP46992 396 aa10.6□□□□□ -0.71
PCD1YLR151C DCW1P36091 449 aa10.59□□□□□ -0.71
PCD1YLR151C EDS1P38073 919 aa10.59□□□□□ -0.71
PCD1YLR151C COQ8P27697 501 aa10.55□□□□□ -0.72
PCD1YLR151C YNL035CP53962 389 aaKnown RBP10.55□□□□□ -0.72
PCD1YLR151C ABP1P15891 592 aaKnown RBP10.54□□□□□ -0.72
PCD1YLR151C HTA1P04911 132 aaKnown RBP10.53□□□□□ -0.72
PCD1YLR151C HTA2P04912 132 aa10.53□□□□□ -0.72
PCD1YLR151C GRE2Q12068 342 aaKnown RBP10.53□□□□□ -0.72
PCD1YLR151C PTC3P34221 468 aaKnown RBP10.52□□□□□ -0.73
PCD1YLR151C NCR1Q12200 1170 aa10.52□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 39.7 ms