RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	SPA2	P23201	1466 aa	Known RBP	6.79	□□□□□ -1.32
PIM1	YBL022C	SSN2	P38931	1420 aa		6.54	□□□□□ -1.36
PIM1	YBL022C	SKI3	P17883	1432 aa	Known RBP	6.51	□□□□□ -1.37
PIM1	YBL022C	SGS1	P35187	1447 aa		6.43	□□□□□ -1.38
PIM1	YBL022C	BFR2	Q06631	534 aa	Known RBP	6.32	□□□□□ -1.4
PIM1	YBL022C	CHD1	P32657	1468 aa		6.3	□□□□□ -1.4
PIM1	YBL022C	INO80	P53115	1489 aa		6.27	□□□□□ -1.41
PIM1	YBL022C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
PIM1	YBL022C	MON2	P48563	1636 aa	Predicted RBP	6.17	□□□□□ -1.42
PIM1	YBL022C	NOP2	P40991	618 aa	Known RBP	6.15	□□□□□ -1.42
PIM1	YBL022C	UFD4	P33202	1483 aa		6.14	□□□□□ -1.43
PIM1	YBL022C	DRS1	P32892	752 aa	Known RBP	6.12	□□□□□ -1.43
PIM1	YBL022C	MMS22	Q06164	1454 aa		6.12	□□□□□ -1.43
PIM1	YBL022C	NUP170	P38181	1502 aa		6.11	□□□□□ -1.43
PIM1	YBL022C	TY1B-DR4	Q07793	1604 aa		6.11	□□□□□ -1.43
PIM1	YBL022C	XRN1	P22147	1528 aa	Known RBP	6.08	□□□□□ -1.44
PIM1	YBL022C	TCB3	Q03640	1545 aa	Known RBP	6.07	□□□□□ -1.44
PIM1	YBL022C	SIN3	P22579	1536 aa		5.98	□□□□□ -1.45
PIM1	YBL022C	PEP1	P32319	1579 aa		5.97	□□□□□ -1.45
PIM1	YBL022C	MLP2	P40457	1679 aa		5.95	□□□□□ -1.46
PIM1	YBL022C	HSL1	P34244	1518 aa		5.93	□□□□□ -1.46
PIM1	YBL022C	SSK2	P53599	1579 aa		5.92	□□□□□ -1.46
PIM1	YBL022C	THO2	P53552	1597 aa	Known RBP	5.91	□□□□□ -1.46
PIM1	YBL022C	TRM732	Q03496	1420 aa		5.91	□□□□□ -1.46
PIM1	YBL022C	STH1	P32597	1359 aa		5.88	□□□□□ -1.47
PIM1	YBL022C	STU1	P38198	1513 aa		5.87	□□□□□ -1.47
PIM1	YBL022C	ECM5	Q03214	1411 aa		5.87	□□□□□ -1.47
PIM1	YBL022C	HIR3	P47171	1648 aa		5.86	□□□□□ -1.47
PIM1	YBL022C	SPP41	P38904	1435 aa		5.85	□□□□□ -1.47
PIM1	YBL022C	EBP2	P36049	427 aa	Known RBP	5.84	□□□□□ -1.47
PIM1	YBL022C	PDR10	P51533	1564 aa		5.84	□□□□□ -1.47
PIM1	YBL022C	ESP1	Q03018	1630 aa		5.84	□□□□□ -1.48
PIM1	YBL022C	REV3	P14284	1504 aa		5.81	□□□□□ -1.48
PIM1	YBL022C	ESC1	Q03661	1658 aa	Known RBP	5.81	□□□□□ -1.48
PIM1	YBL022C	POL1	P13382	1468 aa		5.79	□□□□□ -1.48
PIM1	YBL022C	MYO2	P19524	1574 aa	Known RBP	5.78	□□□□□ -1.48
PIM1	YBL022C	BPT1	P14772	1559 aa		5.77	□□□□□ -1.49
PIM1	YBL022C	YPR148C	Q06523	435 aa		5.75	□□□□□ -1.49
PIM1	YBL022C	SPT6	P23615	1451 aa	Known RBP	5.74	□□□□□ -1.49
PIM1	YBL022C	SCC2	Q04002	1493 aa		5.74	□□□□□ -1.49
PIM1	YBL022C	IRC20	Q06554	1556 aa		5.72	□□□□□ -1.49
PIM1	YBL022C	YLR419W	Q06698	1435 aa	Known RBP	5.72	□□□□□ -1.49
PIM1	YBL022C	URN1	Q06525	465 aa	Known RBP	5.72	□□□□□ -1.49
PIM1	YBL022C	IKI3	Q06706	1349 aa	Known RBP	5.72	□□□□□ -1.49
PIM1	YBL022C	YCF1	P39109	1515 aa	Known RBP	5.72	□□□□□ -1.49
PIM1	YBL022C	TY1B-DR3	Q99231	1755 aa		5.72	□□□□□ -1.49
PIM1	YBL022C	RSE1	Q04693	1361 aa	Known RBP	5.71	□□□□□ -1.5
PIM1	YBL022C	TY3B-G	Q99315	1547 aa		5.7	□□□□□ -1.5
PIM1	YBL022C	ULS1	Q08562	1619 aa		5.69	□□□□□ -1.5
PIM1	YBL022C	ENP1	P38333	483 aa	Known RBP	5.69	□□□□□ -1.5
PIM1	YBL022C	SRB8	P25648	1427 aa		5.68	□□□□□ -1.5
PIM1	YBL022C	SSM4	P40318	1319 aa		5.67	□□□□□ -1.5
PIM1	YBL022C	CAB3	P36076	571 aa		5.66	□□□□□ -1.5
PIM1	YBL022C	MYO4	P32492	1471 aa		5.66	□□□□□ -1.5
PIM1	YBL022C	KOG1	P38873	1557 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	RQC2	Q12532	1038 aa	Known RBP	5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-LR1	P0C2J3	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-F	P0CX63	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-GR2	P0CX64	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-C	P25384	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-DR2	Q03494	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY1B-DR1	Q03855	1755 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-DR3	Q07791	1770 aa	Known RBP	5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-OR1	Q12113	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-DR1	Q12472	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	TY2B-OR2	Q12501	1770 aa		5.65	□□□□□ -1.5
PIM1	YBL022C	PRS1	P32895	427 aa	Known RBP	5.65	□□□□□ -1.51
PIM1	YBL022C	PDR5	P33302	1511 aa	Known RBP	5.64	□□□□□ -1.51
PIM1	YBL022C	SIS2	P36024	562 aa		5.64	□□□□□ -1.51
PIM1	YBL022C	YBT1	P32386	1661 aa		5.64	□□□□□ -1.51
PIM1	YBL022C	YOR1	P53049	1477 aa		5.63	□□□□□ -1.51
PIM1	YBL022C	ATG2	P53855	1592 aa		5.63	□□□□□ -1.51
PIM1	YBL022C	DNA2	P38859	1522 aa		5.63	□□□□□ -1.51
PIM1	YBL022C	TY2B-B	Q12491	1770 aa		5.63	□□□□□ -1.51
PIM1	YBL022C	MTC1	P47018	478 aa	Known RBP	5.62	□□□□□ -1.51
PIM1	YBL022C	GCN2	P15442	1659 aa		5.62	□□□□□ -1.51
PIM1	YBL022C	YPK9	Q12697	1472 aa		5.61	□□□□□ -1.51
PIM1	YBL022C	MIF2	P35201	549 aa		5.6	□□□□□ -1.51
PIM1	YBL022C	SNQ2	P32568	1501 aa	Known RBP	5.6	□□□□□ -1.51
PIM1	YBL022C	BUD4	P47136	1447 aa		5.58	□□□□□ -1.52
PIM1	YBL022C	RKR1	Q04781	1562 aa		5.58	□□□□□ -1.52
PIM1	YBL022C	IME2	P32581	645 aa		5.57	□□□□□ -1.52
PIM1	YBL022C	SPT7	P35177	1332 aa		5.56	□□□□□ -1.52
PIM1	YBL022C	YTA7	P40340	1379 aa		5.56	□□□□□ -1.52
PIM1	YBL022C	TOP2	P06786	1428 aa	Known RBP	5.56	□□□□□ -1.52
PIM1	YBL022C	OPY1	P38271	328 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-H	O13535	1793 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-DR5	P0C2I2	1755 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-DR6	P0C2I3	1755 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-LR2	P0C2I5	1755 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-PR2	P0C2J0	1756 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-JR1	P47098	1755 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-ML2	Q03434	1755 aa	Known RBP	5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-ER1	Q03612	1755 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-ML1	Q04711	1755 aa	Known RBP	5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-GR2	Q12269	1755 aa		5.55	□□□□□ -1.52
PIM1	YBL022C	TY1B-OL	Q12273	1755 aa		5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms