RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W DRS1P32892 752 aaKnown RBP12.4□□□□□ -0.42
UBC9YDL064W MTC1P47018 478 aaKnown RBP12.28□□□□□ -0.44
UBC9YDL064W BFR2Q06631 534 aaKnown RBP10.73□□□□□ -0.69
UBC9YDL064W DIP2Q12220 943 aaPredicted RBP10.54□□□□□ -0.72
UBC9YDL064W AVT3P36062 692 aa10.42□□□□□ -0.74
UBC9YDL064W TFA1P36100 482 aa10.12□□□□□ -0.79
UBC9YDL064W FAP1P53971 965 aa10.03□□□□□ -0.8
UBC9YDL064W ISW2Q08773 1120 aa9.93□□□□□ -0.82
UBC9YDL064W RSE1Q04693 1361 aaKnown RBP9.9□□□□□ -0.82
UBC9YDL064W RPG1P38249 964 aaKnown RBP9.87□□□□□ -0.83
UBC9YDL064W PRI1P10363 409 aa9.84□□□□□ -0.83
UBC9YDL064W AAD16Q02895 342 aa9.65□□□□□ -0.86
UBC9YDL064W RPL17AP05740 184 aaKnown RBP9.58□□□□□ -0.88
UBC9YDL064W RPL17BP46990 184 aaKnown RBP9.58□□□□□ -0.88
UBC9YDL064W REB1P21538 810 aa9.41□□□□□ -0.9
UBC9YDL064W TSR3Q12094 313 aaKnown RBP9.41□□□□□ -0.9
UBC9YDL064W PRY3P47033 881 aa9.4□□□□□ -0.9
UBC9YDL064W SPT21P35209 758 aa9.22□□□□□ -0.93
UBC9YDL064W RIM101P33400 625 aa9.1□□□□□ -0.95
UBC9YDL064W YCK3P39962 524 aa8.99□□□□□ -0.97
UBC9YDL064W MRPL32P25348 183 aa8.96□□□□□ -0.98
UBC9YDL064W YKR023WP36119 530 aaKnown RBP8.94□□□□□ -0.98
UBC9YDL064W OXP1P28273 1286 aa8.87□□□□□ -0.99
UBC9YDL064W PTP3P40048 928 aa8.85□□□□□ -0.99
UBC9YDL064W HAA1Q12753 694 aaKnown RBP8.8□□□□□ -1
UBC9YDL064W HOP09932 586 aa8.78□□□□□ -1
UBC9YDL064W CDC27P38042 758 aa8.75□□□□□ -1.01
UBC9YDL064W YAH1Q12184 172 aaKnown RBP8.74□□□□□ -1.01
UBC9YDL064W DCD1P06773 312 aa8.73□□□□□ -1.01
UBC9YDL064W TFC8Q12308 588 aa8.73□□□□□ -1.01
UBC9YDL064W SSP1P38871 571 aa8.7□□□□□ -1.02
UBC9YDL064W YIL055CP40523 627 aaKnown RBP8.67□□□□□ -1.02
UBC9YDL064W YLR271WQ06152 274 aa8.61□□□□□ -1.03
UBC9YDL064W RSM7P47150 247 aa8.55□□□□□ -1.04
UBC9YDL064W BCH2P36122 765 aa8.5□□□□□ -1.05
UBC9YDL064W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
UBC9YDL064W RQC2Q12532 1038 aaKnown RBP8.47□□□□□ -1.05
UBC9YDL064W AI2P03876 854 aa8.41□□□□□ -1.06
UBC9YDL064W DMA1P38823 416 aa8.4□□□□□ -1.06
UBC9YDL064W CST9Q06032 482 aa8.37□□□□□ -1.07
UBC9YDL064W MGA2P40578 1113 aa8.36□□□□□ -1.07
UBC9YDL064W MAP2P38174 421 aaKnown RBP8.35□□□□□ -1.07
UBC9YDL064W EPS1P40557 701 aa8.34□□□□□ -1.07
UBC9YDL064W SCY1P53009 804 aa8.34□□□□□ -1.07
UBC9YDL064W PSD2P53037 1138 aaKnown RBP8.34□□□□□ -1.07
UBC9YDL064W YGL015CP33199 130 aa8.32□□□□□ -1.08
UBC9YDL064W BBC1P47068 1157 aa8.29□□□□□ -1.08
UBC9YDL064W BDF1P35817 686 aa8.28□□□□□ -1.08
UBC9YDL064W UBP10P53874 792 aaPredicted RBP8.27□□□□□ -1.09
UBC9YDL064W MRM1P25270 412 aa8.17□□□□□ -1.1
UBC9YDL064W SLX5P32828 619 aaKnown RBP8.13□□□□□ -1.11
UBC9YDL064W RCR1P38212 213 aa8.1□□□□□ -1.11
UBC9YDL064W RAM2P29703 316 aa8.06□□□□□ -1.12
UBC9YDL064W RTG3P38165 486 aa8.01□□□□□ -1.13
UBC9YDL064W VPS29P38759 282 aa7.98□□□□□ -1.13
UBC9YDL064W TIF4632P39936 914 aaKnown RBP7.9□□□□□ -1.14
UBC9YDL064W TGL3P40308 642 aa7.88□□□□□ -1.15
UBC9YDL064W SAS10Q12136 610 aaPredicted RBP7.87□□□□□ -1.15
UBC9YDL064W MAK11P20484 414 aaKnown RBP7.86□□□□□ -1.15
UBC9YDL064W YFR006WP43590 535 aa7.86□□□□□ -1.15
UBC9YDL064W STS1P38637 319 aa7.85□□□□□ -1.15
UBC9YDL064W SET1P38827 1080 aaKnown RBP7.85□□□□□ -1.15
UBC9YDL064W YMR1P47147 688 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
UBC9YDL064W DBP1P24784 617 aaKnown RBP7.84□□□□□ -1.15
UBC9YDL064W PIB1Q06651 286 aa7.82□□□□□ -1.16
UBC9YDL064W YOR238WQ08634 303 aa7.81□□□□□ -1.16
UBC9YDL064W COQ8P27697 501 aa7.78□□□□□ -1.16
UBC9YDL064W NSR1P27476 414 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17 RIP-Chip
UBC9YDL064W EDS1P38073 919 aa7.76□□□□□ -1.17
UBC9YDL064W YAP5P40574 245 aa7.76□□□□□ -1.17
UBC9YDL064W MIF2P35201 549 aa7.75□□□□□ -1.17
UBC9YDL064W VPS70P47161 811 aa7.72□□□□□ -1.17
UBC9YDL064W YPR148CQ06523 435 aa7.71□□□□□ -1.18
UBC9YDL064W MST1P07236 462 aa7.66□□□□□ -1.18
UBC9YDL064W VMA1P17255 1071 aaKnown RBP7.66□□□□□ -1.18
UBC9YDL064W PTC3P34221 468 aaKnown RBP7.65□□□□□ -1.18
UBC9YDL064W IFH1P39520 1085 aa7.63□□□□□ -1.19
UBC9YDL064W NOP53Q12080 455 aaKnown RBP7.62□□□□□ -1.19
UBC9YDL064W CKB1P43639 278 aa7.59□□□□□ -1.19
UBC9YDL064W LEU3P08638 886 aa7.58□□□□□ -1.2
UBC9YDL064W SPB4P25808 606 aaPredicted RBP7.58□□□□□ -1.2
UBC9YDL064W GTT3P39996 337 aa7.56□□□□□ -1.2
UBC9YDL064W SAM3Q08986 587 aa7.56□□□□□ -1.2
UBC9YDL064W LEO1P38439 464 aa7.53□□□□□ -1.2
UBC9YDL064W PBS2P08018 668 aa7.52□□□□□ -1.21
UBC9YDL064W ATH1P48016 1211 aa7.52□□□□□ -1.21
UBC9YDL064W GRE2Q12068 342 aaKnown RBP7.52□□□□□ -1.21
UBC9YDL064W GYP5Q12344 894 aa7.51□□□□□ -1.21
UBC9YDL064W REF2P42073 533 aaPredicted RBP7.5□□□□□ -1.21
UBC9YDL064W YOL036WQ08206 761 aa7.5□□□□□ -1.21
UBC9YDL064W WSC3Q12215 556 aa7.5□□□□□ -1.21
UBC9YDL064W GUT1P32190 709 aa7.49□□□□□ -1.21
UBC9YDL064W SET4P42948 560 aa7.49□□□□□ -1.21
UBC9YDL064W SOL3P38858 249 aa7.48□□□□□ -1.21
UBC9YDL064W DCW1P36091 449 aa7.47□□□□□ -1.21
UBC9YDL064W DSF2P38213 736 aa7.47□□□□□ -1.21
UBC9YDL064W VHR2P40041 505 aa7.46□□□□□ -1.22
UBC9YDL064W UBP14P38237 781 aaKnown RBP7.44□□□□□ -1.22
UBC9YDL064W YBL029C-AQ3E756 94 aa7.44□□□□□ -1.22
UBC9YDL064W YGR273CP53329 174 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms