RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeastyeast

Gene HTB1, Length 396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTB1YDR224C MTC1P47018 478 aaKnown RBP16.66■□□□□ 0.26
HTB1YDR224C FAP1P53971 965 aa15.4■□□□□ 0.06
HTB1YDR224C DRS1P32892 752 aaKnown RBP15.3■□□□□ 0.04
HTB1YDR224C PRY3P47033 881 aa14.45□□□□□ -0.1
HTB1YDR224C PRI1P10363 409 aa14.2□□□□□ -0.14
HTB1YDR224C AAD16Q02895 342 aa14.18□□□□□ -0.14
HTB1YDR224C ISW2Q08773 1120 aa13.94□□□□□ -0.18
HTB1YDR224C RPG1P38249 964 aaKnown RBP13.76□□□□□ -0.21
HTB1YDR224C HAA1Q12753 694 aaKnown RBP13.55□□□□□ -0.24
HTB1YDR224C DIP2Q12220 943 aaPredicted RBP13.51□□□□□ -0.25
HTB1YDR224C YCK3P39962 524 aa13.48□□□□□ -0.25
HTB1YDR224C TSR3Q12094 313 aaKnown RBP13.42□□□□□ -0.26
HTB1YDR224C RSE1Q04693 1361 aaKnown RBP13.17□□□□□ -0.3
HTB1YDR224C MRPL32P25348 183 aa12.95□□□□□ -0.34
HTB1YDR224C AVT3P36062 692 aa12.89□□□□□ -0.35
HTB1YDR224C REB1P21538 810 aa12.77□□□□□ -0.37
HTB1YDR224C RPL17AP05740 184 aaKnown RBP12.75□□□□□ -0.37
HTB1YDR224C RPL17BP46990 184 aaKnown RBP12.75□□□□□ -0.37
HTB1YDR224C BFR2Q06631 534 aaKnown RBP12.59□□□□□ -0.39
HTB1YDR224C YGL015CP33199 130 aa12.5□□□□□ -0.41
HTB1YDR224C CDC27P38042 758 aa12.15□□□□□ -0.46
HTB1YDR224C SPT21P35209 758 aa12.11□□□□□ -0.47
HTB1YDR224C YKR023WP36119 530 aaKnown RBP12.05□□□□□ -0.48
HTB1YDR224C UBP10P53874 792 aaPredicted RBP11.91□□□□□ -0.5
HTB1YDR224C HOP09932 586 aa11.84□□□□□ -0.51
HTB1YDR224C MAP2P38174 421 aaKnown RBP11.84□□□□□ -0.51
HTB1YDR224C TFC8Q12308 588 aa11.83□□□□□ -0.52
HTB1YDR224C DCD1P06773 312 aa11.78□□□□□ -0.52
HTB1YDR224C RIM101P33400 625 aa11.66□□□□□ -0.54
HTB1YDR224C SCY1P53009 804 aa11.57□□□□□ -0.56
HTB1YDR224C BUD31P25337 157 aaPredicted RBP11.54□□□□□ -0.56
HTB1YDR224C TIF4632P39936 914 aaKnown RBP11.48□□□□□ -0.57
HTB1YDR224C SLX5P32828 619 aaKnown RBP11.47□□□□□ -0.57
HTB1YDR224C BCH2P36122 765 aa11.43□□□□□ -0.58
HTB1YDR224C TGL3P40308 642 aa11.39□□□□□ -0.59
HTB1YDR224C OXP1P28273 1286 aa11.22□□□□□ -0.61
HTB1YDR224C UBP9P39967 754 aa11.19□□□□□ -0.62
HTB1YDR224C YIL055CP40523 627 aaKnown RBP11.18□□□□□ -0.62
HTB1YDR224C PTP3P40048 928 aa11.17□□□□□ -0.62
HTB1YDR224C EPS1P40557 701 aa11.14□□□□□ -0.63
HTB1YDR224C BDF1P35817 686 aa11.1□□□□□ -0.63
HTB1YDR224C SIS1P25294 352 aaKnown RBP11.02□□□□□ -0.65
HTB1YDR224C BBC1P47068 1157 aa10.97□□□□□ -0.65
HTB1YDR224C TFA1P36100 482 aa10.96□□□□□ -0.65
HTB1YDR224C RSM7P47150 247 aa10.96□□□□□ -0.65
HTB1YDR224C YAH1Q12184 172 aaKnown RBP10.93□□□□□ -0.66
HTB1YDR224C AI2P03876 854 aa10.88□□□□□ -0.67
HTB1YDR224C YOR238WQ08634 303 aa10.85□□□□□ -0.67
HTB1YDR224C MST1P07236 462 aa10.83□□□□□ -0.68
HTB1YDR224C NSR1P27476 414 aaKnown RBP RIP-Chip data10.77□□□□□ -0.69not detected
HTB1YDR224C YAP5P40574 245 aa10.73□□□□□ -0.69
HTB1YDR224C YBL029C-AQ3E756 94 aa10.73□□□□□ -0.69
HTB1YDR224C YLR271WQ06152 274 aa10.68□□□□□ -0.7
HTB1YDR224C VNX1P42839 908 aa10.61□□□□□ -0.71
HTB1YDR224C GTT3P39996 337 aa10.55□□□□□ -0.72
HTB1YDR224C PSD2P53037 1138 aaKnown RBP10.55□□□□□ -0.72
HTB1YDR224C SPP1Q03012 353 aa10.55□□□□□ -0.72
HTB1YDR224C WSC3Q12215 556 aa10.55□□□□□ -0.72
HTB1YDR224C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
HTB1YDR224C SSP1P38871 571 aa10.52□□□□□ -0.73
HTB1YDR224C MRM1P25270 412 aa10.47□□□□□ -0.73
HTB1YDR224C TIF11P38912 153 aaKnown RBP10.42□□□□□ -0.74
HTB1YDR224C PIB1Q06651 286 aa10.4□□□□□ -0.74
HTB1YDR224C MGA2P40578 1113 aa10.3□□□□□ -0.76
HTB1YDR224C YJL171CP46992 396 aa10.3□□□□□ -0.76
HTB1YDR224C ULI1P43604 169 aa10.29□□□□□ -0.76
HTB1YDR224C CST9Q06032 482 aa10.28□□□□□ -0.76
HTB1YDR224C AIR2Q12476 344 aaKnown RBP10.28□□□□□ -0.76
HTB1YDR224C FKH1P40466 484 aa10.27□□□□□ -0.77
HTB1YDR224C RTG3P38165 486 aa10.26□□□□□ -0.77
HTB1YDR224C YMR1P47147 688 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
HTB1YDR224C LDB19Q12502 818 aa10.26□□□□□ -0.77
HTB1YDR224C MSB4Q12317 492 aa10.25□□□□□ -0.77
HTB1YDR224C DBP1P24784 617 aaKnown RBP10.21□□□□□ -0.77
HTB1YDR224C EAP1P36041 632 aaKnown RBP10.21□□□□□ -0.77
HTB1YDR224C VPS29P38759 282 aa10.21□□□□□ -0.77
HTB1YDR224C IOC2Q12072 812 aa10.21□□□□□ -0.77
HTB1YDR224C YFR006WP43590 535 aa10.17□□□□□ -0.78
HTB1YDR224C SET4P42948 560 aa10.16□□□□□ -0.78
HTB1YDR224C YOL036WQ08206 761 aa10.16□□□□□ -0.78
HTB1YDR224C VMA1P17255 1071 aaKnown RBP10.11□□□□□ -0.79
HTB1YDR224C BMT6Q12291 365 aa10.11□□□□□ -0.79
HTB1YDR224C STS1P38637 319 aa10.1□□□□□ -0.79
HTB1YDR224C TRP5P00931 707 aaKnown RBP10.08□□□□□ -0.8
HTB1YDR224C RTG1P32607 177 aa10.06□□□□□ -0.8
HTB1YDR224C SAM3Q08986 587 aa10.05□□□□□ -0.8
HTB1YDR224C RCR1P38212 213 aa10.04□□□□□ -0.8
HTB1YDR224C NCR1Q12200 1170 aa10.02□□□□□ -0.81
HTB1YDR224C YNL035CP53962 389 aaKnown RBP10.01□□□□□ -0.81
HTB1YDR224C SEC61P32915 480 aa9.98□□□□□ -0.81
HTB1YDR224C ABP1P15891 592 aaKnown RBP9.95□□□□□ -0.82
HTB1YDR224C TFG1P41895 735 aaPredicted RBP9.94□□□□□ -0.82
HTB1YDR224C GYP5Q12344 894 aa9.94□□□□□ -0.82
HTB1YDR224C JIP4Q03361 876 aa9.89□□□□□ -0.83
HTB1YDR224C HTA1P04911 132 aaKnown RBP9.88□□□□□ -0.83
HTB1YDR224C HTA2P04912 132 aa9.88□□□□□ -0.83
HTB1YDR224C DCW1P36091 449 aa9.85□□□□□ -0.83
HTB1YDR224C DAN4P47179 1161 aa9.82□□□□□ -0.84
HTB1YDR224C PTC4P38089 393 aa9.79□□□□□ -0.84
HTB1YDR224C SAP30P38429 201 aa9.79□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms