RNA–Protein interactions for RNA: YGR215W

RSM27, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM27, Length 333 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM27YGR215W MTC1P47018 478 aaKnown RBP14.23□□□□□ -0.13
RSM27YGR215W DRS1P32892 752 aaKnown RBP14.04□□□□□ -0.16
RSM27YGR215W FAP1P53971 965 aa12.13□□□□□ -0.47
RSM27YGR215W DIP2Q12220 943 aaPredicted RBP12.03□□□□□ -0.48
RSM27YGR215W BFR2Q06631 534 aaKnown RBP12□□□□□ -0.49
RSM27YGR215W AVT3P36062 692 aa11.75□□□□□ -0.53
RSM27YGR215W ISW2Q08773 1120 aa11.65□□□□□ -0.54
RSM27YGR215W PRI1P10363 409 aa11.59□□□□□ -0.55
RSM27YGR215W RPG1P38249 964 aaKnown RBP11.54□□□□□ -0.56
RSM27YGR215W AAD16Q02895 342 aa11.44□□□□□ -0.58
RSM27YGR215W RSE1Q04693 1361 aaKnown RBP11.43□□□□□ -0.58
RSM27YGR215W PRY3P47033 881 aa11.35□□□□□ -0.59
RSM27YGR215W TSR3Q12094 313 aaKnown RBP11.07□□□□□ -0.64
RSM27YGR215W RPL17AP05740 184 aaKnown RBP11.06□□□□□ -0.64
RSM27YGR215W RPL17BP46990 184 aaKnown RBP11.06□□□□□ -0.64
RSM27YGR215W TFA1P36100 482 aa10.99□□□□□ -0.65
RSM27YGR215W REB1P21538 810 aa10.96□□□□□ -0.65
RSM27YGR215W YCK3P39962 524 aa10.66□□□□□ -0.7
RSM27YGR215W HAA1Q12753 694 aaKnown RBP10.6□□□□□ -0.71
RSM27YGR215W MRPL32P25348 183 aa10.59□□□□□ -0.71
RSM27YGR215W SPT21P35209 758 aa10.56□□□□□ -0.72
RSM27YGR215W RIM101P33400 625 aa10.34□□□□□ -0.75
RSM27YGR215W YKR023WP36119 530 aaKnown RBP10.32□□□□□ -0.76
RSM27YGR215W CDC27P38042 758 aa10.19□□□□□ -0.78
RSM27YGR215W HOP09932 586 aa10.17□□□□□ -0.78
RSM27YGR215W DCD1P06773 312 aa10.13□□□□□ -0.79
RSM27YGR215W TFC8Q12308 588 aa10.1□□□□□ -0.79
RSM27YGR215W OXP1P28273 1286 aa10.05□□□□□ -0.8
RSM27YGR215W YAH1Q12184 172 aaKnown RBP9.94□□□□□ -0.82
RSM27YGR215W PTP3P40048 928 aa9.93□□□□□ -0.82
RSM27YGR215W YIL055CP40523 627 aaKnown RBP9.93□□□□□ -0.82
RSM27YGR215W YGL015CP33199 130 aa9.92□□□□□ -0.82
RSM27YGR215W BCH2P36122 765 aa9.8□□□□□ -0.84
RSM27YGR215W MAP2P38174 421 aaKnown RBP9.8□□□□□ -0.84
RSM27YGR215W SSP1P38871 571 aa9.77□□□□□ -0.85
RSM27YGR215W UBP10P53874 792 aaPredicted RBP9.76□□□□□ -0.85
RSM27YGR215W RSM7P47150 247 aa9.75□□□□□ -0.85
RSM27YGR215W SCY1P53009 804 aa9.74□□□□□ -0.85
RSM27YGR215W YLR271WQ06152 274 aa9.72□□□□□ -0.85
RSM27YGR215W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.64□□□□□ -0.87not detected
RSM27YGR215W EPS1P40557 701 aa9.63□□□□□ -0.87
RSM27YGR215W AI2P03876 854 aa9.62□□□□□ -0.87
RSM27YGR215W BBC1P47068 1157 aa9.57□□□□□ -0.88
RSM27YGR215W BDF1P35817 686 aa9.56□□□□□ -0.88
RSM27YGR215W SLX5P32828 619 aaKnown RBP9.55□□□□□ -0.88
RSM27YGR215W PSD2P53037 1138 aaKnown RBP9.46□□□□□ -0.9
RSM27YGR215W MGA2P40578 1113 aa9.44□□□□□ -0.9
RSM27YGR215W CST9Q06032 482 aa9.44□□□□□ -0.9
RSM27YGR215W TIF4632P39936 914 aaKnown RBP9.38□□□□□ -0.91
RSM27YGR215W MRM1P25270 412 aa9.33□□□□□ -0.92
RSM27YGR215W TGL3P40308 642 aa9.28□□□□□ -0.92
RSM27YGR215W RCR1P38212 213 aa9.15□□□□□ -0.94
RSM27YGR215W RTG3P38165 486 aa9.14□□□□□ -0.95
RSM27YGR215W YAP5P40574 245 aa9.06□□□□□ -0.96
RSM27YGR215W VPS29P38759 282 aa9.05□□□□□ -0.96
RSM27YGR215W PIB1Q06651 286 aa9.05□□□□□ -0.96
RSM27YGR215W NSR1P27476 414 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96 RIP-Chip
RSM27YGR215W YOR238WQ08634 303 aa9.02□□□□□ -0.97
RSM27YGR215W RAM2P29703 316 aa9.01□□□□□ -0.97
RSM27YGR215W DMA1P38823 416 aa9.01□□□□□ -0.97
RSM27YGR215W YFR006WP43590 535 aa9.01□□□□□ -0.97
RSM27YGR215W YMR1P47147 688 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
RSM27YGR215W DBP1P24784 617 aaKnown RBP8.98□□□□□ -0.97
RSM27YGR215W STS1P38637 319 aa8.96□□□□□ -0.98
RSM27YGR215W RQC2Q12532 1038 aaKnown RBP8.95□□□□□ -0.98
RSM27YGR215W MST1P07236 462 aa8.93□□□□□ -0.98
RSM27YGR215W GTT3P39996 337 aa8.89□□□□□ -0.99
RSM27YGR215W MAK11P20484 414 aaKnown RBP8.88□□□□□ -0.99
RSM27YGR215W MIF2P35201 549 aa8.83□□□□□ -1
RSM27YGR215W WSC3Q12215 556 aa8.82□□□□□ -1
RSM27YGR215W VMA1P17255 1071 aaKnown RBP8.81□□□□□ -1
RSM27YGR215W UBP9P39967 754 aa8.81□□□□□ -1
RSM27YGR215W YBL029C-AQ3E756 94 aa8.8□□□□□ -1
RSM27YGR215W BUD31P25337 157 aaPredicted RBP8.78□□□□□ -1
RSM27YGR215W COQ8P27697 501 aa8.78□□□□□ -1
RSM27YGR215W EDS1P38073 919 aa8.75□□□□□ -1.01
RSM27YGR215W SET1P38827 1080 aaKnown RBP8.75□□□□□ -1.01
RSM27YGR215W SET4P42948 560 aa8.71□□□□□ -1.02
RSM27YGR215W YOL036WQ08206 761 aa8.7□□□□□ -1.02
RSM27YGR215W VNX1P42839 908 aa8.69□□□□□ -1.02
RSM27YGR215W PTC3P34221 468 aaKnown RBP8.68□□□□□ -1.02
RSM27YGR215W SAM3Q08986 587 aa8.67□□□□□ -1.02
RSM27YGR215W SPP1Q03012 353 aa8.65□□□□□ -1.02
RSM27YGR215W GYP5Q12344 894 aa8.65□□□□□ -1.02
RSM27YGR215W GRE2Q12068 342 aaKnown RBP8.62□□□□□ -1.03
RSM27YGR215W DCW1P36091 449 aa8.61□□□□□ -1.03
RSM27YGR215W ATH1P48016 1211 aa8.61□□□□□ -1.03
RSM27YGR215W TIF11P38912 153 aaKnown RBP8.6□□□□□ -1.03
RSM27YGR215W MSB4Q12317 492 aa8.6□□□□□ -1.03
RSM27YGR215W ULI1P43604 169 aa8.57□□□□□ -1.04
RSM27YGR215W NOP53Q12080 455 aaKnown RBP8.56□□□□□ -1.04
RSM27YGR215W GUT1P32190 709 aa8.55□□□□□ -1.04
RSM27YGR215W VPS70P47161 811 aa8.55□□□□□ -1.04
RSM27YGR215W TRP5P00931 707 aaKnown RBP8.54□□□□□ -1.04
RSM27YGR215W EAP1P36041 632 aaKnown RBP8.54□□□□□ -1.04
RSM27YGR215W HTA1P04911 132 aaKnown RBP8.53□□□□□ -1.04
RSM27YGR215W HTA2P04912 132 aa8.53□□□□□ -1.04
RSM27YGR215W IFH1P39520 1085 aa8.52□□□□□ -1.05
RSM27YGR215W ABP1P15891 592 aaKnown RBP8.51□□□□□ -1.05
RSM27YGR215W YPR148CQ06523 435 aa8.51□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 32.7 ms