RNA–Protein interactions for RNA: YAL016W

TPD3, Transcript of Regulatory subunit A of the heterotrimeric PP2A complex, yeastyeast

Gene TPD3, Length 1,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPD3YAL016W DRS1P32892 752 aaKnown RBP9.95□□□□□ -0.82
TPD3YAL016W MTC1P47018 478 aaKnown RBP9.27□□□□□ -0.93
TPD3YAL016W BFR2Q06631 534 aaKnown RBP8.88□□□□□ -0.99
TPD3YAL016W TFA1P36100 482 aa8.75□□□□□ -1.01
TPD3YAL016W AVT3P36062 692 aa8.32□□□□□ -1.08
TPD3YAL016W DIP2Q12220 943 aaPredicted RBP8.26□□□□□ -1.09
TPD3YAL016W RQC2Q12532 1038 aaKnown RBP7.99□□□□□ -1.13
TPD3YAL016W RSE1Q04693 1361 aaKnown RBP7.6□□□□□ -1.19
TPD3YAL016W DMA1P38823 416 aa7.48□□□□□ -1.21
TPD3YAL016W ISW2Q08773 1120 aa7.42□□□□□ -1.22
TPD3YAL016W TAF7Q05021 590 aa7.35□□□□□ -1.23
TPD3YAL016W RPL17AP05740 184 aaKnown RBP7.31□□□□□ -1.24
TPD3YAL016W RPG1P38249 964 aaKnown RBP7.31□□□□□ -1.24
TPD3YAL016W RPL17BP46990 184 aaKnown RBP7.31□□□□□ -1.24
TPD3YAL016W PTP3P40048 928 aa7.29□□□□□ -1.24
TPD3YAL016W PRI1P10363 409 aa7.2□□□□□ -1.26
TPD3YAL016W FAP1P53971 965 aa7.2□□□□□ -1.26
TPD3YAL016W REB1P21538 810 aa7.14□□□□□ -1.27
TPD3YAL016W RIM101P33400 625 aa7.11□□□□□ -1.27
TPD3YAL016W SPT21P35209 758 aa7.09□□□□□ -1.27
TPD3YAL016W LEO1P38439 464 aa7.06□□□□□ -1.28
TPD3YAL016W SSP1P38871 571 aa7.06□□□□□ -1.28
TPD3YAL016W AAD16Q02895 342 aa7.03□□□□□ -1.28
TPD3YAL016W OXP1P28273 1286 aa6.94□□□□□ -1.3
TPD3YAL016W YAH1Q12184 172 aaKnown RBP6.93□□□□□ -1.3
TPD3YAL016W TSR3Q12094 313 aaKnown RBP6.87□□□□□ -1.31
TPD3YAL016W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
TPD3YAL016W YLR271WQ06152 274 aa6.84□□□□□ -1.31
TPD3YAL016W SAS10Q12136 610 aaPredicted RBP6.84□□□□□ -1.32
TPD3YAL016W LEU3P08638 886 aa6.83□□□□□ -1.32
TPD3YAL016W YIL055CP40523 627 aaKnown RBP6.8□□□□□ -1.32
TPD3YAL016W MGA2P40578 1113 aa6.74□□□□□ -1.33
TPD3YAL016W YKR023WP36119 530 aaKnown RBP6.73□□□□□ -1.33
TPD3YAL016W PRY3P47033 881 aa6.72□□□□□ -1.33
TPD3YAL016W RSM7P47150 247 aa6.69□□□□□ -1.34
TPD3YAL016W CST9Q06032 482 aa6.69□□□□□ -1.34
TPD3YAL016W DMA2P53924 522 aa6.62□□□□□ -1.35
TPD3YAL016W HOP09932 586 aa6.61□□□□□ -1.35
TPD3YAL016W MRPL32P25348 183 aa6.6□□□□□ -1.35
TPD3YAL016W RPN1P38764 993 aaKnown RBP6.58□□□□□ -1.36
TPD3YAL016W PSD2P53037 1138 aaKnown RBP6.58□□□□□ -1.36
TPD3YAL016W TFC8Q12308 588 aa6.58□□□□□ -1.36
TPD3YAL016W DCD1P06773 312 aa6.57□□□□□ -1.36
TPD3YAL016W AI2P03876 854 aa6.54□□□□□ -1.36
TPD3YAL016W RAM2P29703 316 aa6.51□□□□□ -1.37
TPD3YAL016W ABP1P15891 592 aaKnown RBP6.49□□□□□ -1.37
TPD3YAL016W SPB4P25808 606 aaPredicted RBP6.49□□□□□ -1.37
TPD3YAL016W SET1P38827 1080 aaKnown RBP6.48□□□□□ -1.37
TPD3YAL016W VPS70P47161 811 aa6.47□□□□□ -1.37
TPD3YAL016W CDC27P38042 758 aa6.45□□□□□ -1.38
TPD3YAL016W YPR148CQ06523 435 aa6.44□□□□□ -1.38
TPD3YAL016W CKB1P43639 278 aa6.44□□□□□ -1.38
TPD3YAL016W BCH2P36122 765 aa6.42□□□□□ -1.38
TPD3YAL016W BBC1P47068 1157 aa6.42□□□□□ -1.38
TPD3YAL016W RCR1P38212 213 aa6.42□□□□□ -1.38
TPD3YAL016W RLF2Q12495 606 aa6.4□□□□□ -1.39
TPD3YAL016W MRM1P25270 412 aa6.39□□□□□ -1.39
TPD3YAL016W IFH1P39520 1085 aa6.36□□□□□ -1.39
TPD3YAL016W EPS1P40557 701 aa6.35□□□□□ -1.39
TPD3YAL016W DSF2P38213 736 aa6.34□□□□□ -1.39
TPD3YAL016W YCK3P39962 524 aa6.34□□□□□ -1.39
TPD3YAL016W HAA1Q12753 694 aaKnown RBP6.34□□□□□ -1.39
TPD3YAL016W PBS2P08018 668 aa6.32□□□□□ -1.4
TPD3YAL016W KIN1P13185 1064 aa6.31□□□□□ -1.4
TPD3YAL016W MAK11P20484 414 aaKnown RBP6.31□□□□□ -1.4
TPD3YAL016W RTG3P38165 486 aa6.31□□□□□ -1.4
TPD3YAL016W BDF1P35817 686 aa6.29□□□□□ -1.4
TPD3YAL016W YNR021WP53723 404 aaKnown RBP6.28□□□□□ -1.4
TPD3YAL016W GLC3P32775 704 aa6.27□□□□□ -1.41
TPD3YAL016W COQ8P27697 501 aa6.24□□□□□ -1.41
TPD3YAL016W IES2P40154 320 aa6.22□□□□□ -1.41
TPD3YAL016W MAM3Q12296 706 aa6.22□□□□□ -1.41
TPD3YAL016W VPS29P38759 282 aa6.21□□□□□ -1.41
TPD3YAL016W DIT2P21595 489 aa6.2□□□□□ -1.42
TPD3YAL016W AIM7Q12156 149 aa6.2□□□□□ -1.42
TPD3YAL016W SCY1P53009 804 aa6.19□□□□□ -1.42
TPD3YAL016W NUP42P49686 430 aaKnown RBP6.19□□□□□ -1.42
TPD3YAL016W GUA1P38625 525 aaKnown RBP6.18□□□□□ -1.42
TPD3YAL016W REF2P42073 533 aaPredicted RBP6.18□□□□□ -1.42
TPD3YAL016W HGH1P48362 394 aaKnown RBP6.16□□□□□ -1.42
TPD3YAL016W MIF2P35201 549 aa6.15□□□□□ -1.42
TPD3YAL016W EDS1P38073 919 aa6.15□□□□□ -1.42
TPD3YAL016W MAP2P38174 421 aaKnown RBP6.13□□□□□ -1.43
TPD3YAL016W NOP53Q12080 455 aaKnown RBP6.13□□□□□ -1.43
TPD3YAL016W STS1P38637 319 aa6.12□□□□□ -1.43
TPD3YAL016W UBP10P53874 792 aaPredicted RBP6.11□□□□□ -1.43
TPD3YAL016W ATF2P53296 535 aa6.1□□□□□ -1.43
TPD3YAL016W MAK21Q12176 1025 aaKnown RBP6.1□□□□□ -1.43
TPD3YAL016W YFR006WP43590 535 aa6.09□□□□□ -1.43
TPD3YAL016W YMR1P47147 688 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
TPD3YAL016W COX6P00427 148 aa6.09□□□□□ -1.44
TPD3YAL016W HPC2Q01448 625 aa6.07□□□□□ -1.44
TPD3YAL016W TFB3Q03290 321 aa6.07□□□□□ -1.44
TPD3YAL016W DBP1P24784 617 aaKnown RBP6.07□□□□□ -1.44
TPD3YAL016W YGL015CP33199 130 aa6.05□□□□□ -1.44
TPD3YAL016W PTC3P34221 468 aaKnown RBP6.05□□□□□ -1.44
TPD3YAL016W SLX5P32828 619 aaKnown RBP6.04□□□□□ -1.44
TPD3YAL016W PKC1P24583 1151 aa6.03□□□□□ -1.44
TPD3YAL016W YML020WQ03722 664 aa6.03□□□□□ -1.44
TPD3YAL016W VHR2P40041 505 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms