RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W DRS1P32892 752 aaKnown RBP8.58□□□□□ -1.04
UBP12YJL197W MTC1P47018 478 aaKnown RBP7.87□□□□□ -1.15
UBP12YJL197W TFA1P36100 482 aa7.85□□□□□ -1.15
UBP12YJL197W BFR2Q06631 534 aaKnown RBP7.75□□□□□ -1.17
UBP12YJL197W RQC2Q12532 1038 aaKnown RBP7.48□□□□□ -1.21
UBP12YJL197W AVT3P36062 692 aa7.21□□□□□ -1.26
UBP12YJL197W DIP2Q12220 943 aaPredicted RBP7.07□□□□□ -1.28
UBP12YJL197W TAF7Q05021 590 aa6.99□□□□□ -1.29
UBP12YJL197W DMA1P38823 416 aa6.67□□□□□ -1.34
UBP12YJL197W LEO1P38439 464 aa6.58□□□□□ -1.36
UBP12YJL197W RSE1Q04693 1361 aaKnown RBP6.51□□□□□ -1.37
UBP12YJL197W PTP3P40048 928 aa6.28□□□□□ -1.4
UBP12YJL197W LEU3P08638 886 aa6.28□□□□□ -1.4
UBP12YJL197W ISW2Q08773 1120 aa6.26□□□□□ -1.41
UBP12YJL197W SAS10Q12136 610 aaPredicted RBP6.19□□□□□ -1.42
UBP12YJL197W RPL17AP05740 184 aaKnown RBP6.18□□□□□ -1.42
UBP12YJL197W RPL17BP46990 184 aaKnown RBP6.18□□□□□ -1.42
UBP12YJL197W SSP1P38871 571 aa6.17□□□□□ -1.42
UBP12YJL197W RIM101P33400 625 aa6.14□□□□□ -1.43
UBP12YJL197W RPG1P38249 964 aaKnown RBP6.1□□□□□ -1.43
UBP12YJL197W SPT21P35209 758 aa6.05□□□□□ -1.44
UBP12YJL197W REB1P21538 810 aa6.05□□□□□ -1.44
UBP12YJL197W RPN1P38764 993 aaKnown RBP6.03□□□□□ -1.44
UBP12YJL197W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
UBP12YJL197W DMA2P53924 522 aa5.96□□□□□ -1.45
UBP12YJL197W RLF2Q12495 606 aa5.94□□□□□ -1.46
UBP12YJL197W OXP1P28273 1286 aa5.93□□□□□ -1.46
UBP12YJL197W PRI1P10363 409 aa5.91□□□□□ -1.46
UBP12YJL197W MGA2P40578 1113 aa5.89□□□□□ -1.47
UBP12YJL197W YLR271WQ06152 274 aa5.89□□□□□ -1.47
UBP12YJL197W YAH1Q12184 172 aaKnown RBP5.88□□□□□ -1.47
UBP12YJL197W CKB1P43639 278 aa5.88□□□□□ -1.47
UBP12YJL197W YIL055CP40523 627 aaKnown RBP5.85□□□□□ -1.47
UBP12YJL197W ABP1P15891 592 aaKnown RBP5.84□□□□□ -1.48
UBP12YJL197W YPR148CQ06523 435 aa5.78□□□□□ -1.48
UBP12YJL197W SPB4P25808 606 aaPredicted RBP5.77□□□□□ -1.49
UBP12YJL197W RSM7P47150 247 aa5.77□□□□□ -1.49
UBP12YJL197W AIM44Q99299 758 aa5.76□□□□□ -1.49
UBP12YJL197W IFH1P39520 1085 aa5.76□□□□□ -1.49
UBP12YJL197W HGH1P48362 394 aaKnown RBP5.74□□□□□ -1.49
UBP12YJL197W CST9Q06032 482 aa5.72□□□□□ -1.49
UBP12YJL197W SET1P38827 1080 aaKnown RBP5.7□□□□□ -1.5
UBP12YJL197W AAD16Q02895 342 aa5.7□□□□□ -1.5
UBP12YJL197W VPS70P47161 811 aa5.69□□□□□ -1.5
UBP12YJL197W PSD2P53037 1138 aaKnown RBP5.69□□□□□ -1.5
UBP12YJL197W DSF2P38213 736 aa5.68□□□□□ -1.5
UBP12YJL197W YNR021WP53723 404 aaKnown RBP5.68□□□□□ -1.5
UBP12YJL197W YKR023WP36119 530 aaKnown RBP5.67□□□□□ -1.5
UBP12YJL197W KIN1P13185 1064 aa5.66□□□□□ -1.5
UBP12YJL197W RAM2P29703 316 aa5.65□□□□□ -1.51
UBP12YJL197W AIM7Q12156 149 aa5.63□□□□□ -1.51
UBP12YJL197W AI2P03876 854 aa5.61□□□□□ -1.51
UBP12YJL197W PBS2P08018 668 aa5.61□□□□□ -1.51
UBP12YJL197W NAP1P25293 417 aaKnown RBP5.6□□□□□ -1.51
UBP12YJL197W NOP8Q08287 484 aaPredicted RBP5.6□□□□□ -1.51
UBP12YJL197W TSR3Q12094 313 aaKnown RBP5.59□□□□□ -1.51
UBP12YJL197W YML020WQ03722 664 aa5.58□□□□□ -1.52
UBP12YJL197W ORC1P54784 914 aaPredicted RBP5.56□□□□□ -1.52
UBP12YJL197W TFC8Q12308 588 aa5.56□□□□□ -1.52
UBP12YJL197W MAK21Q12176 1025 aaKnown RBP5.56□□□□□ -1.52
UBP12YJL197W FAP1P53971 965 aa5.56□□□□□ -1.52
UBP12YJL197W BBC1P47068 1157 aa5.55□□□□□ -1.52
UBP12YJL197W HPC2Q01448 625 aa5.55□□□□□ -1.52
UBP12YJL197W MAM3Q12296 706 aa5.54□□□□□ -1.52
UBP12YJL197W MAK11P20484 414 aaKnown RBP5.54□□□□□ -1.52
UBP12YJL197W GLC3P32775 704 aa5.54□□□□□ -1.52
UBP12YJL197W SSA1P10591 642 aaKnown RBP5.52□□□□□ -1.53
UBP12YJL197W GEF1P37020 779 aa5.52□□□□□ -1.53
UBP12YJL197W NOP53Q12080 455 aaKnown RBP5.52□□□□□ -1.53
UBP12YJL197W SLX8P40072 274 aa5.51□□□□□ -1.53
UBP12YJL197W HOP09932 586 aa5.5□□□□□ -1.53
UBP12YJL197W GUA1P38625 525 aaKnown RBP5.5□□□□□ -1.53
UBP12YJL197W IES2P40154 320 aa5.5□□□□□ -1.53
UBP12YJL197W NUP42P49686 430 aaKnown RBP5.49□□□□□ -1.53
UBP12YJL197W REF2P42073 533 aaPredicted RBP5.48□□□□□ -1.53
UBP12YJL197W RTG3P38165 486 aa5.47□□□□□ -1.53
UBP12YJL197W DIT2P21595 489 aa5.45□□□□□ -1.54
UBP12YJL197W SUB2Q07478 446 aaKnown RBP5.45□□□□□ -1.54
UBP12YJL197W MRM1P25270 412 aa5.45□□□□□ -1.54
UBP12YJL197W RCR1P38212 213 aa5.44□□□□□ -1.54
UBP12YJL197W NOP7P53261 605 aaKnown RBP5.44□□□□□ -1.54
UBP12YJL197W ATF2P53296 535 aa5.44□□□□□ -1.54
UBP12YJL197W IOC4Q04213 475 aa5.44□□□□□ -1.54
UBP12YJL197W BRL1P38770 471 aa5.43□□□□□ -1.54
UBP12YJL197W TFB3Q03290 321 aa5.43□□□□□ -1.54
UBP12YJL197W MRPL32P25348 183 aa5.42□□□□□ -1.54
UBP12YJL197W COQ8P27697 501 aa5.42□□□□□ -1.54
UBP12YJL197W COX6P00427 148 aa5.41□□□□□ -1.54
UBP12YJL197W BCH2P36122 765 aa5.41□□□□□ -1.54
UBP12YJL197W DCD1P06773 312 aa5.4□□□□□ -1.54
UBP12YJL197W SLD2P34252 453 aa5.4□□□□□ -1.54
UBP12YJL197W SSA2P10592 639 aaKnown RBP5.4□□□□□ -1.54
UBP12YJL197W SNU71P53207 620 aaKnown RBP5.39□□□□□ -1.55
UBP12YJL197W SSA4P22202 642 aaKnown RBP5.39□□□□□ -1.55
UBP12YJL197W EPS1P40557 701 aa5.39□□□□□ -1.55
UBP12YJL197W MRX12P47084 519 aa5.38□□□□□ -1.55
UBP12YJL197W CDC27P38042 758 aa5.35□□□□□ -1.55
UBP12YJL197W BIM1P40013 344 aa5.34□□□□□ -1.55
UBP12YJL197W GLN1P32288 370 aaKnown RBP5.33□□□□□ -1.56
UBP12YJL197W VPS29P38759 282 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms