RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeastyeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAL004WYAL004W MTC1P47018 478 aaKnown RBP12.11□□□□□ -0.47
YAL004WYAL004W FAP1P53971 965 aa11.65□□□□□ -0.54
YAL004WYAL004W PRY3P47033 881 aa11.01□□□□□ -0.65
YAL004WYAL004W PRI1P10363 409 aa10.65□□□□□ -0.7
YAL004WYAL004W AAD16Q02895 342 aa10.65□□□□□ -0.7
YAL004WYAL004W YCK3P39962 524 aa10.57□□□□□ -0.72
YAL004WYAL004W DRS1P32892 752 aaKnown RBP10.46□□□□□ -0.73
YAL004WYAL004W HAA1Q12753 694 aaKnown RBP10.31□□□□□ -0.76
YAL004WYAL004W ISW2Q08773 1120 aa10.13□□□□□ -0.79
YAL004WYAL004W RPG1P38249 964 aaKnown RBP10.07□□□□□ -0.8
YAL004WYAL004W TSR3Q12094 313 aaKnown RBP9.98□□□□□ -0.81
YAL004WYAL004W MRPL32P25348 183 aa9.55□□□□□ -0.88
YAL004WYAL004W DIP2Q12220 943 aaPredicted RBP9.47□□□□□ -0.89
YAL004WYAL004W YGL015CP33199 130 aa9.4□□□□□ -0.9
YAL004WYAL004W RSE1Q04693 1361 aaKnown RBP9.37□□□□□ -0.91
YAL004WYAL004W RPL17AP05740 184 aaKnown RBP9.12□□□□□ -0.95
YAL004WYAL004W RPL17BP46990 184 aaKnown RBP9.12□□□□□ -0.95
YAL004WYAL004W REB1P21538 810 aa9.1□□□□□ -0.95
YAL004WYAL004W CDC27P38042 758 aa9.04□□□□□ -0.96
YAL004WYAL004W BUD31P25337 157 aaPredicted RBP9.01□□□□□ -0.97
YAL004WYAL004W AVT3P36062 692 aa8.99□□□□□ -0.97
YAL004WYAL004W UBP10P53874 792 aaPredicted RBP8.86□□□□□ -0.99
YAL004WYAL004W YKR023WP36119 530 aaKnown RBP8.83□□□□□ -1
YAL004WYAL004W MAP2P38174 421 aaKnown RBP8.81□□□□□ -1
YAL004WYAL004W SPT21P35209 758 aa8.77□□□□□ -1.01
YAL004WYAL004W TFC8Q12308 588 aa8.63□□□□□ -1.03
YAL004WYAL004W HOP09932 586 aa8.59□□□□□ -1.03
YAL004WYAL004W DCD1P06773 312 aa8.58□□□□□ -1.04
YAL004WYAL004W TGL3P40308 642 aa8.47□□□□□ -1.05
YAL004WYAL004W SCY1P53009 804 aa8.47□□□□□ -1.05
YAL004WYAL004W TIF4632P39936 914 aaKnown RBP8.43□□□□□ -1.06
YAL004WYAL004W SIS1P25294 352 aaKnown RBP8.42□□□□□ -1.06
YAL004WYAL004W SLX5P32828 619 aaKnown RBP8.4□□□□□ -1.06
YAL004WYAL004W UBP9P39967 754 aa8.37□□□□□ -1.07
YAL004WYAL004W BCH2P36122 765 aa8.31□□□□□ -1.08
YAL004WYAL004W BFR2Q06631 534 aaKnown RBP8.31□□□□□ -1.08
YAL004WYAL004W RIM101P33400 625 aa8.27□□□□□ -1.09
YAL004WYAL004W MST1P07236 462 aa8.08□□□□□ -1.12
YAL004WYAL004W EPS1P40557 701 aa8.04□□□□□ -1.12
YAL004WYAL004W BDF1P35817 686 aa8.03□□□□□ -1.12
YAL004WYAL004W YBL029C-AQ3E756 94 aa8□□□□□ -1.13
YAL004WYAL004W OXP1P28273 1286 aa7.97□□□□□ -1.13
YAL004WYAL004W NSR1P27476 414 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
YAL004WYAL004W YOR238WQ08634 303 aa7.92□□□□□ -1.14
YAL004WYAL004W VNX1P42839 908 aa7.9□□□□□ -1.14
YAL004WYAL004W SPP1Q03012 353 aa7.77□□□□□ -1.17
YAL004WYAL004W AIR2Q12476 344 aaKnown RBP7.77□□□□□ -1.17
YAL004WYAL004W PTP3P40048 928 aa7.76□□□□□ -1.17
YAL004WYAL004W YAP5P40574 245 aa7.76□□□□□ -1.17
YAL004WYAL004W FKH1P40466 484 aa7.74□□□□□ -1.17
YAL004WYAL004W YIL055CP40523 627 aaKnown RBP7.72□□□□□ -1.17
YAL004WYAL004W WSC3Q12215 556 aa7.71□□□□□ -1.18
YAL004WYAL004W BBC1P47068 1157 aa7.69□□□□□ -1.18
YAL004WYAL004W RSM7P47150 247 aa7.69□□□□□ -1.18
YAL004WYAL004W AI2P03876 854 aa7.68□□□□□ -1.18
YAL004WYAL004W TIF11P38912 153 aaKnown RBP7.68□□□□□ -1.18
YAL004WYAL004W YJL171CP46992 396 aa7.6□□□□□ -1.19
YAL004WYAL004W IOC2Q12072 812 aa7.58□□□□□ -1.2
YAL004WYAL004W LDB19Q12502 818 aa7.57□□□□□ -1.2
YAL004WYAL004W GTT3P39996 337 aa7.55□□□□□ -1.2
YAL004WYAL004W ULI1P43604 169 aa7.52□□□□□ -1.21
YAL004WYAL004W YAH1Q12184 172 aaKnown RBP7.52□□□□□ -1.21
YAL004WYAL004W BMT6Q12291 365 aa7.49□□□□□ -1.21
YAL004WYAL004W PSD2P53037 1138 aaKnown RBP7.46□□□□□ -1.22
YAL004WYAL004W PIB1Q06651 286 aa7.46□□□□□ -1.22
YAL004WYAL004W YLR271WQ06152 274 aa7.45□□□□□ -1.22
YAL004WYAL004W MSB4Q12317 492 aa7.43□□□□□ -1.22
YAL004WYAL004W EAP1P36041 632 aaKnown RBP7.37□□□□□ -1.23
YAL004WYAL004W RTG1P32607 177 aa7.36□□□□□ -1.23
YAL004WYAL004W MRM1P25270 412 aa7.35□□□□□ -1.23
YAL004WYAL004W YOL036WQ08206 761 aa7.35□□□□□ -1.23
YAL004WYAL004W TRP5P00931 707 aaKnown RBP7.34□□□□□ -1.23
YAL004WYAL004W SET4P42948 560 aa7.32□□□□□ -1.24
YAL004WYAL004W NCR1Q12200 1170 aa7.31□□□□□ -1.24
YAL004WYAL004W SEC61P32915 480 aa7.29□□□□□ -1.24
YAL004WYAL004W YNL035CP53962 389 aaKnown RBP7.28□□□□□ -1.24
YAL004WYAL004W VPS29P38759 282 aa7.27□□□□□ -1.25
YAL004WYAL004W SAM3Q08986 587 aa7.25□□□□□ -1.25
YAL004WYAL004W YMR1P47147 688 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
YAL004WYAL004W VMA1P17255 1071 aaKnown RBP7.23□□□□□ -1.25
YAL004WYAL004W DBP1P24784 617 aaKnown RBP7.23□□□□□ -1.25
YAL004WYAL004W STS1P38637 319 aa7.21□□□□□ -1.26
YAL004WYAL004W YFR006WP43590 535 aa7.19□□□□□ -1.26
YAL004WYAL004W DAN4P47179 1161 aa7.19□□□□□ -1.26
YAL004WYAL004W CST9Q06032 482 aa7.15□□□□□ -1.26
YAL004WYAL004W RTG3P38165 486 aa7.14□□□□□ -1.27
YAL004WYAL004W BCK2P33306 851 aa7.13□□□□□ -1.27
YAL004WYAL004W SAP30P38429 201 aa7.12□□□□□ -1.27
YAL004WYAL004W SSP1P38871 571 aa7.12□□□□□ -1.27
YAL004WYAL004W JIP4Q03361 876 aa7.11□□□□□ -1.27
YAL004WYAL004W CHL1P22516 861 aaPredicted RBP7.1□□□□□ -1.27
YAL004WYAL004W YDL129WQ07555 291 aa7.1□□□□□ -1.27
YAL004WYAL004W TFA1P36100 482 aa7.09□□□□□ -1.27
YAL004WYAL004W TFG1P41895 735 aaPredicted RBP7.09□□□□□ -1.27
YAL004WYAL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
YAL004WYAL004W ABP1P15891 592 aaKnown RBP7.07□□□□□ -1.28
YAL004WYAL004W RCR1P38212 213 aa7.07□□□□□ -1.28
YAL004WYAL004W PRE3P38624 215 aa7.07□□□□□ -1.28
YAL004WYAL004W GYP5Q12344 894 aa7.04□□□□□ -1.28
YAL004WYAL004W MGA2P40578 1113 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms