Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 LINC01006-201ENST00000333319 2292 ntBASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 AC092028.1-203ENST00000608262 953 ntBASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM56-RWDD3S4R434 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 FEM1AP1-201ENST00000431297 1995 ntBASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM56-RWDD3S4R434 AL049796.1-201ENST00000565336 1766 ntBASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM56-RWDD3S4R434 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM56-RWDD3S4R434 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms