RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 NISCHQ9Y2I1 1504 aa47.73■■■■■ 5.23
SMIM11B-205ENST00000624304 CCDC180Q9P1Z9 1646 aa41.82■■■■■ 4.29
SMIM11B-205ENST00000624304 ABCC9O60706 1549 aa40.17■■■■■ 4.02
SMIM11B-205ENST00000624304 ZCCHC6Q5VYS8 1495 aaKnown RBP39.96■■■■□ 3.99
SMIM11B-205ENST00000624304 DCAF8L2P0C7V8 631 aa39.72■■■■□ 3.95
SMIM11B-205ENST00000624304 DCAF1Q9Y4B6 1507 aa39.36■■■■□ 3.89
SMIM11B-205ENST00000624304 NACADO15069 1562 aa39.07■■■■□ 3.85
SMIM11B-205ENST00000624304 MYO15BQ96JP2 1530 aa39.07■■■■□ 3.84
SMIM11B-205ENST00000624304 RB1CC1Q8TDY2 1594 aa38.89■■■■□ 3.82
SMIM11B-205ENST00000624304 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
SMIM11B-205ENST00000624304 SCRIBQ14160 1630 aa38.51■■■■□ 3.75
SMIM11B-205ENST00000624304 UNC13AQ9UPW8 1703 aa38.29■■■■□ 3.72
SMIM11B-205ENST00000624304 BICRAQ9NZM4 1560 aa37.83■■■■□ 3.65
SMIM11B-205ENST00000624304 PABPN1Q86U42 306 aaKnown RBP eCLIP37.82■■■■□ 3.65
SMIM11B-205ENST00000624304 CECR2Q9BXF3 1484 aa37.23■■■■□ 3.55
SMIM11B-205ENST00000624304 SUPT5HO00267 1087 aaKnown RBP36.92■■■■□ 3.5
SMIM11B-205ENST00000624304 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
SMIM11B-205ENST00000624304 BAZ1AQ9NRL2 1556 aaPredicted RBP36.85■■■■□ 3.49
SMIM11B-205ENST00000624304 RSF1Q96T23 1441 aaPredicted RBP36.83■■■■□ 3.49
SMIM11B-205ENST00000624304 SMARCA4P51532 1647 aa36.82■■■■□ 3.49
SMIM11B-205ENST00000624304 EIF4G1Q04637 1599 aaKnown RBP36.69■■■■□ 3.46
SMIM11B-205ENST00000624304 WIZO95785 1651 aa36.64■■■■□ 3.46
SMIM11B-205ENST00000624304 PEG3Q9GZU2 1588 aa36.34■■■■□ 3.41
SMIM11B-205ENST00000624304 ATAD2BQ9ULI0 1458 aa36.34■■■■□ 3.41
SMIM11B-205ENST00000624304 CC2D2AQ9P2K1 1620 aa36.33■■■■□ 3.41
SMIM11B-205ENST00000624304 SMARCA2P51531 1590 aa36.24■■■■□ 3.39
SMIM11B-205ENST00000624304 TOP2AP11388 1531 aaKnown RBP36.11■■■■□ 3.37
SMIM11B-205ENST00000624304 BAZ1BQ9UIG0 1483 aaKnown RBP36.08■■■■□ 3.37
SMIM11B-205ENST00000624304 NCAPD3P42695 1498 aa36.08■■■■□ 3.37
SMIM11B-205ENST00000624304 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
SMIM11B-205ENST00000624304 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
SMIM11B-205ENST00000624304 CCDC88BA6NC98 1476 aa35.8■■■■□ 3.32
SMIM11B-205ENST00000624304 CFTRP13569 1480 aa35.14■■■■□ 3.22
SMIM11B-205ENST00000624304 NESP48681 1621 aa35.14■■■■□ 3.22
SMIM11B-205ENST00000624304 CADPSQ9ULU8 1353 aa35.13■■■■□ 3.21
SMIM11B-205ENST00000624304 CHIC1Q5VXU3 224 aa35.02■■■■□ 3.2
SMIM11B-205ENST00000624304 PRDM2Q13029 1718 aa35■■■■□ 3.19
SMIM11B-205ENST00000624304 LAMC3Q9Y6N6 1575 aa34.94■■■■□ 3.18
SMIM11B-205ENST00000624304 ABCC8Q09428 1581 aa34.93■■■■□ 3.18
SMIM11B-205ENST00000624304 FANCD2Q9BXW9 1451 aa34.77■■■■□ 3.16
SMIM11B-205ENST00000624304 KIF21AQ7Z4S6 1674 aa34.72■■■■□ 3.15
SMIM11B-205ENST00000624304 TRIM41Q8WV44 630 aa34.67■■■■□ 3.14
SMIM11B-205ENST00000624304 PDS5BQ9NTI5 1447 aa34.66■■■■□ 3.14
SMIM11B-205ENST00000624304 WRNQ14191 1432 aaPredicted RBP eCLIP34.66■■■■□ 3.14
SMIM11B-205ENST00000624304 SYNJ1O43426 1573 aa34.61■■■■□ 3.13
SMIM11B-205ENST00000624304 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
SMIM11B-205ENST00000624304 CUX1P39880 1505 aa34.54■■■■□ 3.12
SMIM11B-205ENST00000624304 TOP2BQ02880 1626 aa34.46■■■■□ 3.11
SMIM11B-205ENST00000624304 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
SMIM11B-205ENST00000624304 ERCC6Q03468 1493 aa34.42■■■■□ 3.1
SMIM11B-205ENST00000624304 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
SMIM11B-205ENST00000624304 TOPBP1Q92547 1522 aa34.34■■■■□ 3.09
SMIM11B-205ENST00000624304 DNMBPQ6XZF7 1577 aa34.33■■■■□ 3.09
SMIM11B-205ENST00000624304 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
SMIM11B-205ENST00000624304 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
SMIM11B-205ENST00000624304 THOC2Q8NI27 1593 aaKnown RBP34.21■■■■□ 3.07
SMIM11B-205ENST00000624304 POLA1P09884 1462 aaPredicted RBP34.15■■■■□ 3.06
SMIM11B-205ENST00000624304 FAM9AQ8IZU1 332 aaPredicted RBP34.14■■■■□ 3.06
SMIM11B-205ENST00000624304 SOGA1O94964 1423 aa34.14■■■■□ 3.06
SMIM11B-205ENST00000624304 WDR62O43379 1518 aa34.13■■■■□ 3.05
SMIM11B-205ENST00000624304 RUSC2Q8N2Y8 1516 aa34.1■■■■□ 3.05
SMIM11B-205ENST00000624304 RAD54L2Q9Y4B4 1467 aa34.09■■■■□ 3.05
SMIM11B-205ENST00000624304 CUX2O14529 1486 aa33.96■■■■□ 3.03
SMIM11B-205ENST00000624304 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
SMIM11B-205ENST00000624304 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
SMIM11B-205ENST00000624304 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
SMIM11B-205ENST00000624304 KIF27Q86VH2 1401 aa33.79■■■■□ 3
SMIM11B-205ENST00000624304 TDRD9Q8NDG6 1382 aaKnown RBP33.78■■■■□ 3
SMIM11B-205ENST00000624304 EHMT2Q96KQ7 1210 aa33.77■■■■□ 3
SMIM11B-205ENST00000624304 LOC105371045A0A1W2PR82 267 aa33.76■■■■□ 3
SMIM11B-205ENST00000624304 CSRNP3Q8WYN3 585 aa33.76■■■□□ 2.99
SMIM11B-205ENST00000624304 IFT140Q96RY7 1462 aa33.75■■■□□ 2.99
SMIM11B-205ENST00000624304 EEA1Q15075 1411 aa33.75■■■□□ 2.99
SMIM11B-205ENST00000624304 ZNF608Q9ULD9 1512 aaPredicted RBP33.72■■■□□ 2.99
SMIM11B-205ENST00000624304 AQRO60306 1485 aaKnown RBP eCLIP33.67■■■□□ 2.98
SMIM11B-205ENST00000624304 ABCA5Q8WWZ7 1642 aa33.67■■■□□ 2.98
SMIM11B-205ENST00000624304 IGF1RP08069 1367 aa33.62■■■□□ 2.97
SMIM11B-205ENST00000624304 GAPVD1Q14C86 1478 aa33.62■■■□□ 2.97
SMIM11B-205ENST00000624304 EIF4G3O43432 1585 aaKnown RBP33.55■■■□□ 2.96
SMIM11B-205ENST00000624304 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
SMIM11B-205ENST00000624304 PRXQ9BXM0 1461 aa33.46■■■□□ 2.95
SMIM11B-205ENST00000624304 KIF21BO75037 1637 aa33.44■■■□□ 2.94
SMIM11B-205ENST00000624304 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
SMIM11B-205ENST00000624304 RAPGEF2Q9Y4G8 1499 aa33.44■■■□□ 2.94
SMIM11B-205ENST00000624304 CARMIL1Q5VZK9 1371 aa33.42■■■□□ 2.94
SMIM11B-205ENST00000624304 GRIN2BQ13224 1484 aa33.4■■■□□ 2.94
SMIM11B-205ENST00000624304 CUL7Q14999 1698 aa33.35■■■□□ 2.93
SMIM11B-205ENST00000624304 HRCP23327 699 aa33.35■■■□□ 2.93
SMIM11B-205ENST00000624304 GOLGA3Q08378 1498 aa33.34■■■□□ 2.93
SMIM11B-205ENST00000624304 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
SMIM11B-205ENST00000624304 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
SMIM11B-205ENST00000624304 ADAMTS12P58397 1594 aa33.25■■■□□ 2.91
SMIM11B-205ENST00000624304 FHAD1B1AJZ9 1412 aa33.2■■■□□ 2.91
SMIM11B-205ENST00000624304 MAGI1Q96QZ7 1491 aaPredicted RBP33.16■■■□□ 2.9
SMIM11B-205ENST00000624304 TNIKQ9UKE5 1360 aa33.14■■■□□ 2.9
SMIM11B-205ENST00000624304 FBLN2P98095 1184 aa33.1■■■□□ 2.89
SMIM11B-205ENST00000624304 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
SMIM11B-205ENST00000624304 RANGAP1P46060 587 aaPredicted RBP33.05■■■□□ 2.88
SMIM11B-205ENST00000624304 CHMP7Q8WUX9 453 aaPredicted RBP33.05■■■□□ 2.88
SMIM11B-205ENST00000624304 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms