Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COMMD4Q9H0A8 OR7E47P-201ENST00000546390 1422 ntBASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 AL031602.1-201ENST00000633169 911 ntBASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COMMD4Q9H0A8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 FEM1AP4-201ENST00000443167 1987 ntBASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.83■□□□□ 0.61
COMMD4Q9H0A8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COMMD4Q9H0A8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 AC239859.2-201ENST00000444165 318 ntBASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 AC009299.2-201ENST00000482477 511 ntBASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 AC133637.1-201ENST00000624115 1537 ntBASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.82■□□□□ 0.6
COMMD4Q9H0A8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.81■□□□□ 0.6
COMMD4Q9H0A8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 AL451085.2-201ENST00000605085 799 ntBASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 AC068587.7-201ENST00000641602 218 ntBASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COMMD4Q9H0A8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD4Q9H0A8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms