Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HMGCLP35914 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLP35914 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLP35914 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLP35914 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLP35914 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCLP35914 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLP35914 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HMGCLP35914 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.37■■□□□ 1.01
HMGCLP35914 LINC02228-203ENST00000641970 1355 ntBASIC21.36■■□□□ 1.01
HMGCLP35914 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLP35914 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.36■■□□□ 1.01
HMGCLP35914 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGCLP35914 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
HMGCLP35914 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGCLP35914 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLP35914 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
HMGCLP35914 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.36■■□□□ 1.01
HMGCLP35914 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLP35914 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
HMGCLP35914 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.36■■□□□ 1.01
HMGCLP35914 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HMGCLP35914 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLP35914 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLP35914 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HMGCLP35914 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.35■■□□□ 1.01
HMGCLP35914 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.35■■□□□ 1.01
HMGCLP35914 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
HMGCLP35914 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HMGCLP35914 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.35■■□□□ 1.01
HMGCLP35914 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 AC003102.1-202ENST00000563394 1796 ntBASIC21.34■■□□□ 1.01
HMGCLP35914 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.34■■□□□ 1.01
HMGCLP35914 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HMGCLP35914 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.34■■□□□ 1.01
HMGCLP35914 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.34■■□□□ 1.01
HMGCLP35914 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.34■■□□□ 1.01
HMGCLP35914 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HMGCLP35914 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HMGCLP35914 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.33■■□□□ 1.01
HMGCLP35914 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCLP35914 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCLP35914 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
HMGCLP35914 LINC00565-201ENST00000562710 2331 ntBASIC21.33■■□□□ 1.01
HMGCLP35914 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCLP35914 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HMGCLP35914 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HMGCLP35914 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.33■■□□□ 1.01
HMGCLP35914 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCLP35914 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HMGCLP35914 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.33■■□□□ 1.01
HMGCLP35914 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HMGCLP35914 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.33■■□□□ 1.01
HMGCLP35914 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
HMGCLP35914 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.33■■□□□ 1
HMGCLP35914 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.32■■□□□ 1
HMGCLP35914 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
HMGCLP35914 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.32■■□□□ 1
HMGCLP35914 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HMGCLP35914 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HMGCLP35914 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.32■■□□□ 1
HMGCLP35914 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
HMGCLP35914 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.32■■□□□ 1
HMGCLP35914 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.32■■□□□ 1
HMGCLP35914 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.32■■□□□ 1
HMGCLP35914 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
HMGCLP35914 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.31■■□□□ 1
HMGCLP35914 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.31■■□□□ 1
HMGCLP35914 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 AC010542.4-201ENST00000563151 1910 ntBASIC21.31■■□□□ 1
HMGCLP35914 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.31■■□□□ 1
HMGCLP35914 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.31■■□□□ 1
HMGCLP35914 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.31■■□□□ 1
HMGCLP35914 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms