Protein–RNA interactions for Protein: Q9H8W2

LINC00472, Putative uncharacterized protein encoded by LINC00472, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472Q9H8W2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00472Q9H8W2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00472Q9H8W2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00472Q9H8W2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 AC139795.1-202ENST00000500444 432 ntBASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 SNX5-217ENST00000606557 1087 ntBASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00472Q9H8W2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 LINC01006-201ENST00000333319 2292 ntBASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 AC004687.1-201ENST00000579003 1625 ntBASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00472Q9H8W2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC00472Q9H8W2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 AC104564.3-201ENST00000582367 638 ntBASIC12.46□□□□□ -0.41
LINC00472Q9H8W2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LINC00472Q9H8W2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms