RNA–Protein interactions for RNA: ENST00000518977.5

TNIP1-205, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-205ENST00000518977 NISCHQ9Y2I1 1504 aa45.1■■■■■ 4.81
TNIP1-205ENST00000518977 CCDC180Q9P1Z9 1646 aa38.77■■■■□ 3.8
TNIP1-205ENST00000518977 ZCCHC6Q5VYS8 1495 aaKnown RBP38■■■■□ 3.67
TNIP1-205ENST00000518977 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
TNIP1-205ENST00000518977 DCAF8L2P0C7V8 631 aa37.42■■■■□ 3.58
TNIP1-205ENST00000518977 DCAF1Q9Y4B6 1507 aa37.08■■■■□ 3.53
TNIP1-205ENST00000518977 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
TNIP1-205ENST00000518977 ABCC9O60706 1549 aa36.4■■■■□ 3.42
TNIP1-205ENST00000518977 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
TNIP1-205ENST00000518977 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
TNIP1-205ENST00000518977 NACADO15069 1562 aa35.99■■■■□ 3.35
TNIP1-205ENST00000518977 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
TNIP1-205ENST00000518977 RSF1Q96T23 1441 aaPredicted RBP35.36■■■■□ 3.25
TNIP1-205ENST00000518977 CHIC1Q5VXU3 224 aa35.34■■■■□ 3.25
TNIP1-205ENST00000518977 CECR2Q9BXF3 1484 aa35.17■■■■□ 3.22
TNIP1-205ENST00000518977 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.19
TNIP1-205ENST00000518977 MROH2BQ7Z745 1585 aa34.99■■■■□ 3.19
TNIP1-205ENST00000518977 WIZO95785 1651 aa34.76■■■■□ 3.16
TNIP1-205ENST00000518977 BAZ1AQ9NRL2 1556 aaPredicted RBP34.7■■■■□ 3.15
TNIP1-205ENST00000518977 PABPN1Q86U42 306 aaKnown RBP eCLIP34.62■■■■□ 3.13
TNIP1-205ENST00000518977 BICRAQ9NZM4 1560 aa34.6■■■■□ 3.13
TNIP1-205ENST00000518977 SMARCA4P51532 1647 aa34.5■■■■□ 3.11
TNIP1-205ENST00000518977 TRIM41Q8WV44 630 aa34.25■■■■□ 3.07
TNIP1-205ENST00000518977 TOP2AP11388 1531 aaKnown RBP34.24■■■■□ 3.07
TNIP1-205ENST00000518977 LOC105371045A0A1W2PR82 267 aa34.21■■■■□ 3.07
TNIP1-205ENST00000518977 CCDC88BA6NC98 1476 aa34.05■■■■□ 3.04
TNIP1-205ENST00000518977 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
TNIP1-205ENST00000518977 EIF4G1Q04637 1599 aaKnown RBP33.99■■■■□ 3.03
TNIP1-205ENST00000518977 PEG3Q9GZU2 1588 aa33.93■■■■□ 3.02
TNIP1-205ENST00000518977 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
TNIP1-205ENST00000518977 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
TNIP1-205ENST00000518977 ABCC8Q09428 1581 aa33.67■■■□□ 2.98
TNIP1-205ENST00000518977 BAZ1BQ9UIG0 1483 aaKnown RBP33.63■■■□□ 2.97
TNIP1-205ENST00000518977 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
TNIP1-205ENST00000518977 PCGF6Q9BYE7 350 aa33.39■■■□□ 2.94
TNIP1-205ENST00000518977 NCAPD3P42695 1498 aa33.3■■■□□ 2.92
TNIP1-205ENST00000518977 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
TNIP1-205ENST00000518977 WRNQ14191 1432 aaPredicted RBP eCLIP33.23■■■□□ 2.91
TNIP1-205ENST00000518977 SOGA1O94964 1423 aa33.21■■■□□ 2.91
TNIP1-205ENST00000518977 SYNJ1O43426 1573 aa33.1■■■□□ 2.89
TNIP1-205ENST00000518977 RUSC2Q8N2Y8 1516 aa33.09■■■□□ 2.89
TNIP1-205ENST00000518977 TRIM26Q12899 539 aaPredicted RBP33.01■■■□□ 2.87
TNIP1-205ENST00000518977 EEA1Q15075 1411 aa32.97■■■□□ 2.87
TNIP1-205ENST00000518977 CSRNP3Q8WYN3 585 aa32.97■■■□□ 2.87
TNIP1-205ENST00000518977 HRCP23327 699 aa32.89■■■□□ 2.86
TNIP1-205ENST00000518977 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
TNIP1-205ENST00000518977 CFTRP13569 1480 aa32.8■■■□□ 2.84
TNIP1-205ENST00000518977 TOP2BQ02880 1626 aa32.8■■■□□ 2.84
TNIP1-205ENST00000518977 TNIKQ9UKE5 1360 aa32.74■■■□□ 2.83
TNIP1-205ENST00000518977 UBTFP17480 764 aaKnown RBP32.71■■■□□ 2.83
TNIP1-205ENST00000518977 BIVM-ERCC5R4GMW8 1640 aa32.71■■■□□ 2.83
TNIP1-205ENST00000518977 CEP162Q5TB80 1403 aa32.69■■■□□ 2.82
TNIP1-205ENST00000518977 GOLGA3Q08378 1498 aa32.68■■■□□ 2.82
TNIP1-205ENST00000518977 PPARGC1BQ86YN6 1023 aaKnown RBP32.65■■■□□ 2.82
TNIP1-205ENST00000518977 CUX1P39880 1505 aa32.63■■■□□ 2.81
TNIP1-205ENST00000518977 CEP164Q9UPV0 1460 aa32.58■■■□□ 2.81
TNIP1-205ENST00000518977 CADPSQ9ULU8 1353 aa32.57■■■□□ 2.8
TNIP1-205ENST00000518977 KIF21BO75037 1637 aa32.57■■■□□ 2.8
TNIP1-205ENST00000518977 PRDM2Q13029 1718 aa32.55■■■□□ 2.8
TNIP1-205ENST00000518977 RAPGEF2Q9Y4G8 1499 aa32.44■■■□□ 2.78
TNIP1-205ENST00000518977 KIF27Q86VH2 1401 aa32.28■■■□□ 2.76
TNIP1-205ENST00000518977 PRXQ9BXM0 1461 aa32.26■■■□□ 2.76
TNIP1-205ENST00000518977 CLIP1P30622 1438 aa32.25■■■□□ 2.75
TNIP1-205ENST00000518977 TTBK1Q5TCY1 1321 aaPredicted RBP32.24■■■□□ 2.75
TNIP1-205ENST00000518977 FANCD2Q9BXW9 1451 aa32.24■■■□□ 2.75
TNIP1-205ENST00000518977 NESP48681 1621 aa32.22■■■□□ 2.75
TNIP1-205ENST00000518977 RANGAP1P46060 587 aaPredicted RBP32.19■■■□□ 2.74
TNIP1-205ENST00000518977 ERICH3Q5RHP9 1530 aa32.19■■■□□ 2.74
TNIP1-205ENST00000518977 FGD5Q6ZNL6 1462 aa32.15■■■□□ 2.74
TNIP1-205ENST00000518977 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
TNIP1-205ENST00000518977 CUX2O14529 1486 aa32.11■■■□□ 2.73
TNIP1-205ENST00000518977 VPS8Q8N3P4 1428 aa32.03■■■□□ 2.72
TNIP1-205ENST00000518977 IGF1RP08069 1367 aa32.01■■■□□ 2.72
TNIP1-205ENST00000518977 LAMC3Q9Y6N6 1575 aa31.99■■■□□ 2.71
TNIP1-205ENST00000518977 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
TNIP1-205ENST00000518977 TOPBP1Q92547 1522 aa31.96■■■□□ 2.71
TNIP1-205ENST00000518977 ZEB1P37275 1124 aaPredicted RBP31.93■■■□□ 2.7
TNIP1-205ENST00000518977 RAD54L2Q9Y4B4 1467 aa31.9■■■□□ 2.7
TNIP1-205ENST00000518977 POLA1P09884 1462 aaPredicted RBP31.88■■■□□ 2.69
TNIP1-205ENST00000518977 CARMIL1Q5VZK9 1371 aa31.85■■■□□ 2.69
TNIP1-205ENST00000518977 ARAP1Q96P48 1450 aa31.85■■■□□ 2.69
TNIP1-205ENST00000518977 URB2Q14146 1524 aaKnown RBP31.82■■■□□ 2.68
TNIP1-205ENST00000518977 APLP2Q06481 763 aa31.81■■■□□ 2.68
TNIP1-205ENST00000518977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.8■■■□□ 2.68
TNIP1-205ENST00000518977 ABCA10Q8WWZ4 1543 aa31.79■■■□□ 2.68
TNIP1-205ENST00000518977 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
TNIP1-205ENST00000518977 ARHGAP35Q9NRY4 1499 aa31.71■■■□□ 2.67
TNIP1-205ENST00000518977 KIF21AQ7Z4S6 1674 aa31.7■■■□□ 2.67
TNIP1-205ENST00000518977 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
TNIP1-205ENST00000518977 WDR97A6NE52 1622 aa31.59■■■□□ 2.65
TNIP1-205ENST00000518977 TDRD9Q8NDG6 1382 aaKnown RBP31.55■■■□□ 2.64
TNIP1-205ENST00000518977 KANK4Q5T7N3 995 aaPredicted RBP31.55■■■□□ 2.64
TNIP1-205ENST00000518977 HNRNPUL2Q1KMD3 747 aaKnown RBP31.5■■■□□ 2.63
TNIP1-205ENST00000518977 CUL7Q14999 1698 aa31.5■■■□□ 2.63
TNIP1-205ENST00000518977 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
TNIP1-205ENST00000518977 GAPVD1Q14C86 1478 aa31.44■■■□□ 2.62
TNIP1-205ENST00000518977 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
TNIP1-205ENST00000518977 P3H3Q8IVL6 736 aa31.39■■■□□ 2.62
TNIP1-205ENST00000518977 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
TNIP1-205ENST00000518977 CTTNBP2Q8WZ74 1663 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms