RNA–Protein interactions for RNA: ENST00000338561.9

RARG-201, Transcript of retinoic acid receptor gamma, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RARG, Length 1,836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARG-201ENST00000338561 NISCHQ9Y2I1 1504 aa49.43■■■■■ 5.5
RARG-201ENST00000338561 CCDC180Q9P1Z9 1646 aa43.3■■■■■ 4.52
RARG-201ENST00000338561 ZCCHC6Q5VYS8 1495 aaKnown RBP41.48■■■■■ 4.23
RARG-201ENST00000338561 ABCC9O60706 1549 aa41.01■■■■■ 4.16
RARG-201ENST00000338561 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
RARG-201ENST00000338561 DCAF8L2P0C7V8 631 aa40.7■■■■■ 4.11
RARG-201ENST00000338561 MYO15BQ96JP2 1530 aa40.58■■■■■ 4.09
RARG-201ENST00000338561 NACADO15069 1562 aa40.36■■■■■ 4.05
RARG-201ENST00000338561 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
RARG-201ENST00000338561 SHROOM4Q9ULL8 1493 aa39.95■■■■□ 3.99
RARG-201ENST00000338561 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
RARG-201ENST00000338561 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.87
RARG-201ENST00000338561 BICRAQ9NZM4 1560 aa38.84■■■■□ 3.81
RARG-201ENST00000338561 PABPN1Q86U42 306 aaKnown RBP eCLIP38.57■■■■□ 3.77
RARG-201ENST00000338561 CECR2Q9BXF3 1484 aa38.36■■■■□ 3.73
RARG-201ENST00000338561 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
RARG-201ENST00000338561 RSF1Q96T23 1441 aaPredicted RBP38.21■■■■□ 3.71
RARG-201ENST00000338561 BAZ1AQ9NRL2 1556 aaPredicted RBP38.2■■■■□ 3.71
RARG-201ENST00000338561 MROH2BQ7Z745 1585 aa38.14■■■■□ 3.7
RARG-201ENST00000338561 SMARCA4P51532 1647 aa38.06■■■■□ 3.68
RARG-201ENST00000338561 WIZO95785 1651 aa37.82■■■■□ 3.65
RARG-201ENST00000338561 EIF4G1Q04637 1599 aaKnown RBP37.68■■■■□ 3.62
RARG-201ENST00000338561 PEG3Q9GZU2 1588 aa37.66■■■■□ 3.62
RARG-201ENST00000338561 SMARCA2P51531 1590 aa37.49■■■■□ 3.59
RARG-201ENST00000338561 ATAD2BQ9ULI0 1458 aa37.48■■■■□ 3.59
RARG-201ENST00000338561 TOP2AP11388 1531 aaKnown RBP37.46■■■■□ 3.59
RARG-201ENST00000338561 BAZ1BQ9UIG0 1483 aaKnown RBP37.24■■■■□ 3.55
RARG-201ENST00000338561 NCAPD3P42695 1498 aa37.22■■■■□ 3.55
RARG-201ENST00000338561 HMGXB3Q12766 1538 aa37.18■■■■□ 3.54
RARG-201ENST00000338561 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
RARG-201ENST00000338561 CCDC88BA6NC98 1476 aa37.03■■■■□ 3.52
RARG-201ENST00000338561 CHIC1Q5VXU3 224 aa36.62■■■■□ 3.45
RARG-201ENST00000338561 DNAJC5BQ9UF47 199 aa36.42■■■■□ 3.42
RARG-201ENST00000338561 CFTRP13569 1480 aa36.32■■■■□ 3.4
RARG-201ENST00000338561 CADPSQ9ULU8 1353 aa36.22■■■■□ 3.39
RARG-201ENST00000338561 PRDM2Q13029 1718 aa36.2■■■■□ 3.39
RARG-201ENST00000338561 ABCC8Q09428 1581 aa36.13■■■■□ 3.37
RARG-201ENST00000338561 TRIM41Q8WV44 630 aa36.11■■■■□ 3.37
RARG-201ENST00000338561 LAMC3Q9Y6N6 1575 aa36.02■■■■□ 3.36
RARG-201ENST00000338561 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.35
RARG-201ENST00000338561 NESP48681 1621 aa35.93■■■■□ 3.34
RARG-201ENST00000338561 SYNJ1O43426 1573 aa35.84■■■■□ 3.33
RARG-201ENST00000338561 FANCD2Q9BXW9 1451 aa35.81■■■■□ 3.32
RARG-201ENST00000338561 TOP2BQ02880 1626 aa35.76■■■■□ 3.32
RARG-201ENST00000338561 BIVM-ERCC5R4GMW8 1640 aa35.75■■■■□ 3.31
RARG-201ENST00000338561 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
RARG-201ENST00000338561 CUX1P39880 1505 aa35.69■■■■□ 3.3
RARG-201ENST00000338561 CEP164Q9UPV0 1460 aa35.62■■■■□ 3.29
RARG-201ENST00000338561 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
RARG-201ENST00000338561 DNMBPQ6XZF7 1577 aa35.48■■■■□ 3.27
RARG-201ENST00000338561 TOPBP1Q92547 1522 aa35.41■■■■□ 3.26
RARG-201ENST00000338561 SOGA1O94964 1423 aa35.39■■■■□ 3.26
RARG-201ENST00000338561 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
RARG-201ENST00000338561 EEA1Q15075 1411 aa35.37■■■■□ 3.25
RARG-201ENST00000338561 FAM9AQ8IZU1 332 aaPredicted RBP35.35■■■■□ 3.25
RARG-201ENST00000338561 FGD5Q6ZNL6 1462 aa35.33■■■■□ 3.25
RARG-201ENST00000338561 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
RARG-201ENST00000338561 MRC2Q9UBG0 1479 aa35.27■■■■□ 3.24
RARG-201ENST00000338561 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
RARG-201ENST00000338561 POLA1P09884 1462 aaPredicted RBP35.21■■■■□ 3.23
RARG-201ENST00000338561 LOC105371045A0A1W2PR82 267 aa35.13■■■■□ 3.21
RARG-201ENST00000338561 CSRNP3Q8WYN3 585 aa35.13■■■■□ 3.21
RARG-201ENST00000338561 WDR62O43379 1518 aa35.12■■■■□ 3.21
RARG-201ENST00000338561 KIF27Q86VH2 1401 aa35.09■■■■□ 3.21
RARG-201ENST00000338561 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
RARG-201ENST00000338561 ABCA10Q8WWZ4 1543 aa35.05■■■■□ 3.2
RARG-201ENST00000338561 RAD54L2Q9Y4B4 1467 aa35.04■■■■□ 3.2
RARG-201ENST00000338561 CUX2O14529 1486 aa35.03■■■■□ 3.2
RARG-201ENST00000338561 WDR97A6NE52 1622 aa35■■■■□ 3.19
RARG-201ENST00000338561 KIF21BO75037 1637 aa34.93■■■■□ 3.18
RARG-201ENST00000338561 TARBP1Q13395 1621 aaKnown RBP34.93■■■■□ 3.18
RARG-201ENST00000338561 GOLGA3Q08378 1498 aa34.83■■■■□ 3.17
RARG-201ENST00000338561 PRXQ9BXM0 1461 aa34.81■■■■□ 3.16
RARG-201ENST00000338561 IFT140Q96RY7 1462 aa34.81■■■■□ 3.16
RARG-201ENST00000338561 ABCA5Q8WWZ7 1642 aa34.81■■■■□ 3.16
RARG-201ENST00000338561 IGF1RP08069 1367 aa34.8■■■■□ 3.16
RARG-201ENST00000338561 EHMT2Q96KQ7 1210 aa34.79■■■■□ 3.16
RARG-201ENST00000338561 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
RARG-201ENST00000338561 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
RARG-201ENST00000338561 RAPGEF2Q9Y4G8 1499 aa34.71■■■■□ 3.15
RARG-201ENST00000338561 GAPVD1Q14C86 1478 aa34.7■■■■□ 3.15
RARG-201ENST00000338561 TNIKQ9UKE5 1360 aa34.67■■■■□ 3.14
RARG-201ENST00000338561 CUL7Q14999 1698 aa34.63■■■■□ 3.13
RARG-201ENST00000338561 CARMIL1Q5VZK9 1371 aa34.61■■■■□ 3.13
RARG-201ENST00000338561 UBTFP17480 764 aaKnown RBP34.6■■■■□ 3.13
RARG-201ENST00000338561 PBRM1Q86U86 1689 aa34.57■■■■□ 3.12
RARG-201ENST00000338561 ZNF608Q9ULD9 1512 aaPredicted RBP34.57■■■■□ 3.12
RARG-201ENST00000338561 AQRO60306 1485 aaKnown RBP eCLIP34.55■■■■□ 3.123e-9■■■■■ 44.8
RARG-201ENST00000338561 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
RARG-201ENST00000338561 GRIN2BQ13224 1484 aa34.48■■■■□ 3.11
RARG-201ENST00000338561 CEP162Q5TB80 1403 aa34.44■■■■□ 3.1
RARG-201ENST00000338561 ADAMTS12P58397 1594 aa34.36■■■■□ 3.09
RARG-201ENST00000338561 FHAD1B1AJZ9 1412 aa34.34■■■■□ 3.09
RARG-201ENST00000338561 SNAPC4Q5SXM2 1469 aa34.26■■■■□ 3.07
RARG-201ENST00000338561 MAGI1Q96QZ7 1491 aaPredicted RBP34.24■■■■□ 3.07
RARG-201ENST00000338561 CLIP1P30622 1438 aa34.23■■■■□ 3.07
RARG-201ENST00000338561 CTTNBP2Q8WZ74 1663 aa34.2■■■■□ 3.07
RARG-201ENST00000338561 SYNJ2O15056 1496 aa34.1■■■■□ 3.05
RARG-201ENST00000338561 GRIN2AQ12879 1464 aa34.06■■■■□ 3.04
RARG-201ENST00000338561 RANGAP1P46060 587 aaPredicted RBP34.02■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms