Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 AC066615.1-201ENST00000640911 628 ntBASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TMEFF1Q8IYR6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 SLC29A4P1-201ENST00000398760 971 ntBASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.56■■□□□ 1.04
TMEFF1Q8IYR6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 AP001160.3-201ENST00000601484 763 ntBASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TMEFF1Q8IYR6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 MYCNOS-205ENST00000641950 531 ntBASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TMEFF1Q8IYR6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TMEFF1Q8IYR6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.52■■□□□ 1.04
TMEFF1Q8IYR6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
TMEFF1Q8IYR6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.52■■□□□ 1.03
TMEFF1Q8IYR6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 MIR4651-201ENST00000582622 73 ntBASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.51■■□□□ 1.03
TMEFF1Q8IYR6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TMEFF1Q8IYR6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms