RNA–Protein interactions for RNA: ENST00000443670.1

LINC01117-201, Transcript of long intergenic non-protein coding RNA 1117, humanhuman

TSL 5 BASIC

Gene LINC01117, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01117-201ENST00000443670 NISCHQ9Y2I1 1504 aa51.27■■■■■ 5.8
LINC01117-201ENST00000443670 CCDC180Q9P1Z9 1646 aa45.7■■■■■ 4.91
LINC01117-201ENST00000443670 ABCC9O60706 1549 aa45.16■■■■■ 4.82
LINC01117-201ENST00000443670 RB1CC1Q8TDY2 1594 aa43.24■■■■■ 4.51
LINC01117-201ENST00000443670 NACADO15069 1562 aa43.12■■■■■ 4.49
LINC01117-201ENST00000443670 DCAF8L2P0C7V8 631 aa42.96■■■■■ 4.47
LINC01117-201ENST00000443670 MYO15BQ96JP2 1530 aa42.76■■■■■ 4.44
LINC01117-201ENST00000443670 ZCCHC6Q5VYS8 1495 aaKnown RBP42.62■■■■■ 4.41
LINC01117-201ENST00000443670 DCAF1Q9Y4B6 1507 aa42.41■■■■■ 4.38
LINC01117-201ENST00000443670 UNC13AQ9UPW8 1703 aa42.18■■■■■ 4.34
LINC01117-201ENST00000443670 PABPN1Q86U42 306 aaKnown RBP eCLIP42.16■■■■■ 4.34
LINC01117-201ENST00000443670 BICRAQ9NZM4 1560 aa41.99■■■■■ 4.31
LINC01117-201ENST00000443670 DNAJC5BQ9UF47 199 aa41.92■■■■■ 4.3
LINC01117-201ENST00000443670 SCRIBQ14160 1630 aa41.66■■■■■ 4.26
LINC01117-201ENST00000443670 SHROOM4Q9ULL8 1493 aa41.52■■■■■ 4.24
LINC01117-201ENST00000443670 EIF4G1Q04637 1599 aaKnown RBP40.9■■■■■ 4.14
LINC01117-201ENST00000443670 CC2D2AQ9P2K1 1620 aa40.82■■■■■ 4.13
LINC01117-201ENST00000443670 CECR2Q9BXF3 1484 aa40.64■■■■■ 4.1
LINC01117-201ENST00000443670 NCAPD3P42695 1498 aa39.84■■■■□ 3.97
LINC01117-201ENST00000443670 SMARCA4P51532 1647 aa39.83■■■■□ 3.97
LINC01117-201ENST00000443670 ATAD2BQ9ULI0 1458 aa39.79■■■■□ 3.96
LINC01117-201ENST00000443670 BAZ1AQ9NRL2 1556 aaPredicted RBP39.74■■■■□ 3.95
LINC01117-201ENST00000443670 SMARCA2P51531 1590 aa39.67■■■■□ 3.94
LINC01117-201ENST00000443670 HMGXB3Q12766 1538 aa39.56■■■■□ 3.92
LINC01117-201ENST00000443670 MROH2BQ7Z745 1585 aa39.5■■■■□ 3.91
LINC01117-201ENST00000443670 PEG3Q9GZU2 1588 aa39.49■■■■□ 3.91
LINC01117-201ENST00000443670 BAZ1BQ9UIG0 1483 aaKnown RBP39.38■■■■□ 3.9
LINC01117-201ENST00000443670 WIZO95785 1651 aa39■■■■□ 3.83
LINC01117-201ENST00000443670 NESP48681 1621 aa38.97■■■■□ 3.83
LINC01117-201ENST00000443670 ERCC6Q03468 1493 aa38.93■■■■□ 3.82
LINC01117-201ENST00000443670 RSF1Q96T23 1441 aaPredicted RBP38.92■■■■□ 3.82
LINC01117-201ENST00000443670 LAMC3Q9Y6N6 1575 aa38.79■■■■□ 3.8
LINC01117-201ENST00000443670 CUX2O14529 1486 aa38.73■■■■□ 3.79
LINC01117-201ENST00000443670 CADPSQ9ULU8 1353 aa38.65■■■■□ 3.78
LINC01117-201ENST00000443670 TOP2AP11388 1531 aaKnown RBP38.59■■■■□ 3.77
LINC01117-201ENST00000443670 PDS5BQ9NTI5 1447 aa38.57■■■■□ 3.77
LINC01117-201ENST00000443670 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
LINC01117-201ENST00000443670 KIF21AQ7Z4S6 1674 aa38.41■■■■□ 3.74
LINC01117-201ENST00000443670 CFTRP13569 1480 aa38.33■■■■□ 3.73
LINC01117-201ENST00000443670 MRC2Q9UBG0 1479 aa38.2■■■■□ 3.71
LINC01117-201ENST00000443670 CCDC88BA6NC98 1476 aa38.17■■■■□ 3.7
LINC01117-201ENST00000443670 FANCD2Q9BXW9 1451 aa38.17■■■■□ 3.7
LINC01117-201ENST00000443670 CEP164Q9UPV0 1460 aa38.15■■■■□ 3.7
LINC01117-201ENST00000443670 WDR62O43379 1518 aa38.09■■■■□ 3.69
LINC01117-201ENST00000443670 DNAJC5Q9H3Z4 198 aa38.07■■■■□ 3.68
LINC01117-201ENST00000443670 PRDM2Q13029 1718 aa37.85■■■■□ 3.65
LINC01117-201ENST00000443670 URB2Q14146 1524 aaKnown RBP37.82■■■■□ 3.65
LINC01117-201ENST00000443670 SUPT5HO00267 1087 aaKnown RBP37.56■■■■□ 3.6
LINC01117-201ENST00000443670 TOPBP1Q92547 1522 aa37.51■■■■□ 3.6
LINC01117-201ENST00000443670 ABCC8Q09428 1581 aa37.48■■■■□ 3.59
LINC01117-201ENST00000443670 DNMBPQ6XZF7 1577 aa37.41■■■■□ 3.58
LINC01117-201ENST00000443670 IFT140Q96RY7 1462 aa37.39■■■■□ 3.58
LINC01117-201ENST00000443670 ZNF608Q9ULD9 1512 aaPredicted RBP37.26■■■■□ 3.56
LINC01117-201ENST00000443670 POLA1P09884 1462 aaPredicted RBP37.18■■■■□ 3.54
LINC01117-201ENST00000443670 TARBP1Q13395 1621 aaKnown RBP37.12■■■■□ 3.53
LINC01117-201ENST00000443670 CUX1P39880 1505 aa37.08■■■■□ 3.53
LINC01117-201ENST00000443670 OSCARQ8IYS5 282 aa37.05■■■■□ 3.52
LINC01117-201ENST00000443670 EIF4G3O43432 1585 aaKnown RBP37.04■■■■□ 3.52
LINC01117-201ENST00000443670 SOGA1O94964 1423 aa37.02■■■■□ 3.52
LINC01117-201ENST00000443670 RAD54L2Q9Y4B4 1467 aa37.02■■■■□ 3.52
LINC01117-201ENST00000443670 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
LINC01117-201ENST00000443670 AQRO60306 1485 aaKnown RBP eCLIP37.01■■■■□ 3.51
LINC01117-201ENST00000443670 TDRD9Q8NDG6 1382 aaKnown RBP36.87■■■■□ 3.49
LINC01117-201ENST00000443670 WDR97A6NE52 1622 aa36.8■■■■□ 3.48
LINC01117-201ENST00000443670 WRNQ14191 1432 aaPredicted RBP eCLIP36.68■■■■□ 3.46
LINC01117-201ENST00000443670 ABCA10Q8WWZ4 1543 aa36.65■■■■□ 3.46
LINC01117-201ENST00000443670 GRIN2BQ13224 1484 aa36.62■■■■□ 3.45
LINC01117-201ENST00000443670 SNAPC4Q5SXM2 1469 aa36.62■■■■□ 3.45
LINC01117-201ENST00000443670 TOP2BQ02880 1626 aa36.62■■■■□ 3.45
LINC01117-201ENST00000443670 CHD1O14646 1710 aa36.61■■■■□ 3.45
LINC01117-201ENST00000443670 BIVM-ERCC5R4GMW8 1640 aa36.6■■■■□ 3.45
LINC01117-201ENST00000443670 FBLN2P98095 1184 aa36.6■■■■□ 3.45
LINC01117-201ENST00000443670 SYNJ1O43426 1573 aa36.59■■■■□ 3.45
LINC01117-201ENST00000443670 GAPVD1Q14C86 1478 aa36.57■■■■□ 3.45
LINC01117-201ENST00000443670 MAGI1Q96QZ7 1491 aaPredicted RBP36.57■■■■□ 3.45
LINC01117-201ENST00000443670 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
LINC01117-201ENST00000443670 ABCA5Q8WWZ7 1642 aa36.51■■■■□ 3.43
LINC01117-201ENST00000443670 CHMP7Q8WUX9 453 aaPredicted RBP36.46■■■■□ 3.43
LINC01117-201ENST00000443670 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.42
LINC01117-201ENST00000443670 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.42
LINC01117-201ENST00000443670 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.42
LINC01117-201ENST00000443670 SYNJ2O15056 1496 aa36.44■■■■□ 3.42
LINC01117-201ENST00000443670 ARHGEF11O15085 1522 aa36.44■■■■□ 3.42
LINC01117-201ENST00000443670 PBRM1Q86U86 1689 aa36.43■■■■□ 3.42
LINC01117-201ENST00000443670 CLASP1Q7Z460 1538 aa36.29■■■■□ 3.4
LINC01117-201ENST00000443670 ADAMTS12P58397 1594 aa36.19■■■■□ 3.38
LINC01117-201ENST00000443670 ERICH3Q5RHP9 1530 aa36.18■■■■□ 3.38
LINC01117-201ENST00000443670 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
LINC01117-201ENST00000443670 FHAD1B1AJZ9 1412 aa36.15■■■■□ 3.38
LINC01117-201ENST00000443670 CYB5RLQ6IPT4 315 aa36.14■■■■□ 3.38
LINC01117-201ENST00000443670 ARAP1Q96P48 1450 aa36.12■■■■□ 3.37
LINC01117-201ENST00000443670 NUP160Q12769 1436 aa36.05■■■■□ 3.36
LINC01117-201ENST00000443670 CEP170Q5SW79 1584 aa35.98■■■■□ 3.35
LINC01117-201ENST00000443670 KIF27Q86VH2 1401 aa35.95■■■■□ 3.35
LINC01117-201ENST00000443670 IGF1RP08069 1367 aa35.9■■■■□ 3.34
LINC01117-201ENST00000443670 SHROOM2Q13796 1616 aa35.77■■■■□ 3.32
LINC01117-201ENST00000443670 ERCC6L2Q5T890 1561 aa35.76■■■■□ 3.31
LINC01117-201ENST00000443670 CUL7Q14999 1698 aa35.72■■■■□ 3.31
LINC01117-201ENST00000443670 JPH4Q96JJ6 628 aa35.67■■■■□ 3.3
LINC01117-201ENST00000443670 RUSC2Q8N2Y8 1516 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 832.9 ms