Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PCDHGB6Q9Y5F9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGB6Q9Y5F9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PCDHGB6Q9Y5F9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGB6Q9Y5F9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGB6Q9Y5F9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.42■■□□□ 1.66
PCDHGB6Q9Y5F9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.42■■□□□ 1.66
PCDHGB6Q9Y5F9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGB6Q9Y5F9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGB6Q9Y5F9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGB6Q9Y5F9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.39■■□□□ 1.66
PCDHGB6Q9Y5F9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGB6Q9Y5F9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.37■■□□□ 1.65
PCDHGB6Q9Y5F9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGB6Q9Y5F9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHGB6Q9Y5F9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB6Q9Y5F9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGB6Q9Y5F9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHGB6Q9Y5F9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGB6Q9Y5F9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
PCDHGB6Q9Y5F9 AP006261.1-201ENST00000584783 668 ntBASIC25.34■■□□□ 1.65
PCDHGB6Q9Y5F9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
PCDHGB6Q9Y5F9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGB6Q9Y5F9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGB6Q9Y5F9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGB6Q9Y5F9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGB6Q9Y5F9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGB6Q9Y5F9 RPS2P35-201ENST00000443417 897 ntBASIC25.31■■□□□ 1.64
PCDHGB6Q9Y5F9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDHGB6Q9Y5F9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGB6Q9Y5F9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDHGB6Q9Y5F9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDHGB6Q9Y5F9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGB6Q9Y5F9 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.26■■□□□ 1.63
PCDHGB6Q9Y5F9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGB6Q9Y5F9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHGB6Q9Y5F9 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHGB6Q9Y5F9 AL162393.1-201ENST00000437852 946 ntBASIC25.21■■□□□ 1.63
PCDHGB6Q9Y5F9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.63
PCDHGB6Q9Y5F9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHGB6Q9Y5F9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGB6Q9Y5F9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGB6Q9Y5F9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHGB6Q9Y5F9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHGB6Q9Y5F9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGB6Q9Y5F9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGB6Q9Y5F9 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGB6Q9Y5F9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHGB6Q9Y5F9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGB6Q9Y5F9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGB6Q9Y5F9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.16■■□□□ 1.62
PCDHGB6Q9Y5F9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHGB6Q9Y5F9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGB6Q9Y5F9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PCDHGB6Q9Y5F9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGB6Q9Y5F9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGB6Q9Y5F9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.14■■□□□ 1.62
PCDHGB6Q9Y5F9 MIR3665-201ENST00000578708 105 ntBASIC25.14■■□□□ 1.62
PCDHGB6Q9Y5F9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGB6Q9Y5F9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGB6Q9Y5F9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHGB6Q9Y5F9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGB6Q9Y5F9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGB6Q9Y5F9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHGB6Q9Y5F9 AL161658.1-201ENST00000623641 1967 ntBASIC25.11■■□□□ 1.61
PCDHGB6Q9Y5F9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGB6Q9Y5F9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGB6Q9Y5F9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGB6Q9Y5F9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHGB6Q9Y5F9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGB6Q9Y5F9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHGB6Q9Y5F9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGB6Q9Y5F9 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHGB6Q9Y5F9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDHGB6Q9Y5F9 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.09■■□□□ 1.61
PCDHGB6Q9Y5F9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDHGB6Q9Y5F9 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGB6Q9Y5F9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHGB6Q9Y5F9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGB6Q9Y5F9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGB6Q9Y5F9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB6Q9Y5F9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB6Q9Y5F9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB6Q9Y5F9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB6Q9Y5F9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB6Q9Y5F9 MIR762-201ENST00000390236 83 ntBASIC25.03■■□□□ 1.6
PCDHGB6Q9Y5F9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDHGB6Q9Y5F9 WASH5P-204ENST00000632292 975 ntBASIC25.03■■□□□ 1.6
PCDHGB6Q9Y5F9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB6Q9Y5F9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGB6Q9Y5F9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB6Q9Y5F9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDHGB6Q9Y5F9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDHGB6Q9Y5F9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGB6Q9Y5F9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGB6Q9Y5F9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGB6Q9Y5F9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGB6Q9Y5F9 AC005559.1-201ENST00000589661 871 ntBASIC24.97■■□□□ 1.59
PCDHGB6Q9Y5F9 DUX4L28-201ENST00000623687 678 ntBASIC24.97■■□□□ 1.59
PCDHGB6Q9Y5F9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms