Protein–RNA interactions for Protein: Q8N5C6

SRBD1, S1 RNA-binding domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 995 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRBD1Q8N5C6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SRBD1Q8N5C6 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
SRBD1Q8N5C6 AL391121.1-201ENST00000607967 1349 ntBASIC31.61■■■□□ 2.65
SRBD1Q8N5C6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SRBD1Q8N5C6 WASH5P-204ENST00000632292 975 ntBASIC31.61■■■□□ 2.65
SRBD1Q8N5C6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
SRBD1Q8N5C6 SUZ12P1-203ENST00000578195 985 ntBASIC31.58■■■□□ 2.65
SRBD1Q8N5C6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SRBD1Q8N5C6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
SRBD1Q8N5C6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SRBD1Q8N5C6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
SRBD1Q8N5C6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
SRBD1Q8N5C6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SRBD1Q8N5C6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SRBD1Q8N5C6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SRBD1Q8N5C6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SRBD1Q8N5C6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SRBD1Q8N5C6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.52■■■□□ 2.64
SRBD1Q8N5C6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SRBD1Q8N5C6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SRBD1Q8N5C6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SRBD1Q8N5C6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SRBD1Q8N5C6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.49■■■□□ 2.63
SRBD1Q8N5C6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SRBD1Q8N5C6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.49■■■□□ 2.63
SRBD1Q8N5C6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SRBD1Q8N5C6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SRBD1Q8N5C6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SRBD1Q8N5C6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SRBD1Q8N5C6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
SRBD1Q8N5C6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.45■■■□□ 2.63
SRBD1Q8N5C6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SRBD1Q8N5C6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
SRBD1Q8N5C6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SRBD1Q8N5C6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SRBD1Q8N5C6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SRBD1Q8N5C6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SRBD1Q8N5C6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SRBD1Q8N5C6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.37■■■□□ 2.61
SRBD1Q8N5C6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SRBD1Q8N5C6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.35■■■□□ 2.61
SRBD1Q8N5C6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SRBD1Q8N5C6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SRBD1Q8N5C6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SRBD1Q8N5C6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SRBD1Q8N5C6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.33■■■□□ 2.61
SRBD1Q8N5C6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.33■■■□□ 2.61
SRBD1Q8N5C6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.32■■■□□ 2.6
SRBD1Q8N5C6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
SRBD1Q8N5C6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
SRBD1Q8N5C6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SRBD1Q8N5C6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SRBD1Q8N5C6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SRBD1Q8N5C6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.25■■■□□ 2.59
SRBD1Q8N5C6 AL161658.1-201ENST00000623641 1967 ntBASIC31.23■■■□□ 2.59
SRBD1Q8N5C6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SRBD1Q8N5C6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SRBD1Q8N5C6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SRBD1Q8N5C6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SRBD1Q8N5C6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.22■■■□□ 2.59
SRBD1Q8N5C6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
SRBD1Q8N5C6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
SRBD1Q8N5C6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.2■■■□□ 2.59
SRBD1Q8N5C6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SRBD1Q8N5C6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SRBD1Q8N5C6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SRBD1Q8N5C6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SRBD1Q8N5C6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SRBD1Q8N5C6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SRBD1Q8N5C6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SRBD1Q8N5C6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SRBD1Q8N5C6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SRBD1Q8N5C6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
SRBD1Q8N5C6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SRBD1Q8N5C6 MIR762-201ENST00000390236 83 ntBASIC31.14■■■□□ 2.58
SRBD1Q8N5C6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.57
SRBD1Q8N5C6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.13■■■□□ 2.57
SRBD1Q8N5C6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.13■■■□□ 2.57
SRBD1Q8N5C6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SRBD1Q8N5C6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.12■■■□□ 2.57
SRBD1Q8N5C6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.12■■■□□ 2.57
SRBD1Q8N5C6 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.12■■■□□ 2.57
SRBD1Q8N5C6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SRBD1Q8N5C6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SRBD1Q8N5C6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.1■■■□□ 2.57
SRBD1Q8N5C6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SRBD1Q8N5C6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SRBD1Q8N5C6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SRBD1Q8N5C6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SRBD1Q8N5C6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SRBD1Q8N5C6 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.09■■■□□ 2.57
SRBD1Q8N5C6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SRBD1Q8N5C6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.09■■■□□ 2.57
SRBD1Q8N5C6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.08■■■□□ 2.57
SRBD1Q8N5C6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.08■■■□□ 2.57
SRBD1Q8N5C6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SRBD1Q8N5C6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SRBD1Q8N5C6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.07■■■□□ 2.56
SRBD1Q8N5C6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
SRBD1Q8N5C6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms