Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.97■■■□□ 2.23
TTC39CQ8N584 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TTC39CQ8N584 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
TTC39CQ8N584 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.95■■■□□ 2.22
TTC39CQ8N584 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
TTC39CQ8N584 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.95■■■□□ 2.22
TTC39CQ8N584 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
TTC39CQ8N584 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.94■■■□□ 2.22
TTC39CQ8N584 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.94■■■□□ 2.22
TTC39CQ8N584 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TTC39CQ8N584 AL391121.1-201ENST00000607967 1349 ntBASIC28.93■■■□□ 2.22
TTC39CQ8N584 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TTC39CQ8N584 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
TTC39CQ8N584 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
TTC39CQ8N584 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.91■■■□□ 2.22
TTC39CQ8N584 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
TTC39CQ8N584 CAHM-201ENST00000604200 896 ntBASIC28.9■■■□□ 2.22
TTC39CQ8N584 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
TTC39CQ8N584 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
TTC39CQ8N584 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TTC39CQ8N584 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
TTC39CQ8N584 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TTC39CQ8N584 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.86■■■□□ 2.21
TTC39CQ8N584 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TTC39CQ8N584 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.84■■■□□ 2.21
TTC39CQ8N584 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.84■■■□□ 2.21
TTC39CQ8N584 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TTC39CQ8N584 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TTC39CQ8N584 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TTC39CQ8N584 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TTC39CQ8N584 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.82■■■□□ 2.2
TTC39CQ8N584 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
TTC39CQ8N584 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
TTC39CQ8N584 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.81■■■□□ 2.2
TTC39CQ8N584 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
TTC39CQ8N584 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TTC39CQ8N584 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC39CQ8N584 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
TTC39CQ8N584 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
TTC39CQ8N584 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TTC39CQ8N584 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.75■■■□□ 2.19
TTC39CQ8N584 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TTC39CQ8N584 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TTC39CQ8N584 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TTC39CQ8N584 SUZ12P1-203ENST00000578195 985 ntBASIC28.74■■■□□ 2.19
TTC39CQ8N584 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TTC39CQ8N584 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.71■■■□□ 2.19
TTC39CQ8N584 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TTC39CQ8N584 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TTC39CQ8N584 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.7■■■□□ 2.18
TTC39CQ8N584 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.69■■■□□ 2.18
TTC39CQ8N584 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
TTC39CQ8N584 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
TTC39CQ8N584 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.66■■■□□ 2.18
TTC39CQ8N584 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
TTC39CQ8N584 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.64■■■□□ 2.18
TTC39CQ8N584 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
TTC39CQ8N584 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC39CQ8N584 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.63■■■□□ 2.17
TTC39CQ8N584 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TTC39CQ8N584 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC39CQ8N584 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
TTC39CQ8N584 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TTC39CQ8N584 AL161658.1-201ENST00000623641 1967 ntBASIC28.59■■■□□ 2.17
TTC39CQ8N584 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
TTC39CQ8N584 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
TTC39CQ8N584 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC39CQ8N584 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39CQ8N584 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39CQ8N584 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.57■■■□□ 2.16
TTC39CQ8N584 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
TTC39CQ8N584 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
TTC39CQ8N584 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.55■■■□□ 2.16
TTC39CQ8N584 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.54■■■□□ 2.16
TTC39CQ8N584 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39CQ8N584 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.54■■■□□ 2.16
TTC39CQ8N584 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
TTC39CQ8N584 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.53■■■□□ 2.16
TTC39CQ8N584 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39CQ8N584 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.52■■■□□ 2.16
TTC39CQ8N584 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39CQ8N584 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TTC39CQ8N584 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
TTC39CQ8N584 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
TTC39CQ8N584 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TTC39CQ8N584 MIR762-201ENST00000390236 83 ntBASIC28.51■■■□□ 2.15
TTC39CQ8N584 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TTC39CQ8N584 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.5■■■□□ 2.15
TTC39CQ8N584 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.5■■■□□ 2.15
TTC39CQ8N584 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
TTC39CQ8N584 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TTC39CQ8N584 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.49■■■□□ 2.15
TTC39CQ8N584 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms