Protein–RNA interactions for Protein: Q8N1G2

CMTR1, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1Q8N1G2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CMTR1Q8N1G2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CMTR1Q8N1G2 CAHM-201ENST00000604200 896 ntBASIC31.69■■■□□ 2.66
CMTR1Q8N1G2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.68■■■□□ 2.66
CMTR1Q8N1G2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
CMTR1Q8N1G2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CMTR1Q8N1G2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.65■■■□□ 2.66
CMTR1Q8N1G2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CMTR1Q8N1G2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CMTR1Q8N1G2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CMTR1Q8N1G2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CMTR1Q8N1G2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CMTR1Q8N1G2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
CMTR1Q8N1G2 WASH5P-204ENST00000632292 975 ntBASIC31.58■■■□□ 2.65
CMTR1Q8N1G2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CMTR1Q8N1G2 AL391121.1-201ENST00000607967 1349 ntBASIC31.57■■■□□ 2.64
CMTR1Q8N1G2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CMTR1Q8N1G2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.57■■■□□ 2.64
CMTR1Q8N1G2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CMTR1Q8N1G2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CMTR1Q8N1G2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
CMTR1Q8N1G2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CMTR1Q8N1G2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
CMTR1Q8N1G2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CMTR1Q8N1G2 SUZ12P1-203ENST00000578195 985 ntBASIC31.54■■■□□ 2.64
CMTR1Q8N1G2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CMTR1Q8N1G2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CMTR1Q8N1G2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
CMTR1Q8N1G2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CMTR1Q8N1G2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CMTR1Q8N1G2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CMTR1Q8N1G2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CMTR1Q8N1G2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CMTR1Q8N1G2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.49■■■□□ 2.63
CMTR1Q8N1G2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.49■■■□□ 2.63
CMTR1Q8N1G2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CMTR1Q8N1G2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CMTR1Q8N1G2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.48■■■□□ 2.63
CMTR1Q8N1G2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
CMTR1Q8N1G2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CMTR1Q8N1G2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.46■■■□□ 2.63
CMTR1Q8N1G2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CMTR1Q8N1G2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
CMTR1Q8N1G2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.43■■■□□ 2.62
CMTR1Q8N1G2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.42■■■□□ 2.62
CMTR1Q8N1G2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CMTR1Q8N1G2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CMTR1Q8N1G2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CMTR1Q8N1G2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CMTR1Q8N1G2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CMTR1Q8N1G2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.37■■■□□ 2.61
CMTR1Q8N1G2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CMTR1Q8N1G2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CMTR1Q8N1G2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CMTR1Q8N1G2 AL161658.1-201ENST00000623641 1967 ntBASIC31.36■■■□□ 2.61
CMTR1Q8N1G2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CMTR1Q8N1G2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CMTR1Q8N1G2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.34■■■□□ 2.61
CMTR1Q8N1G2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CMTR1Q8N1G2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CMTR1Q8N1G2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CMTR1Q8N1G2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
CMTR1Q8N1G2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CMTR1Q8N1G2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.29■■■□□ 2.6
CMTR1Q8N1G2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
CMTR1Q8N1G2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CMTR1Q8N1G2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.27■■■□□ 2.6
CMTR1Q8N1G2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CMTR1Q8N1G2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.26■■■□□ 2.59
CMTR1Q8N1G2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.25■■■□□ 2.59
CMTR1Q8N1G2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.25■■■□□ 2.59
CMTR1Q8N1G2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.25■■■□□ 2.59
CMTR1Q8N1G2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.24■■■□□ 2.59
CMTR1Q8N1G2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CMTR1Q8N1G2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CMTR1Q8N1G2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.23■■■□□ 2.59
CMTR1Q8N1G2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CMTR1Q8N1G2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CMTR1Q8N1G2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CMTR1Q8N1G2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CMTR1Q8N1G2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CMTR1Q8N1G2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CMTR1Q8N1G2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.2■■■□□ 2.58
CMTR1Q8N1G2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.19■■■□□ 2.58
CMTR1Q8N1G2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CMTR1Q8N1G2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CMTR1Q8N1G2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CMTR1Q8N1G2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CMTR1Q8N1G2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CMTR1Q8N1G2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CMTR1Q8N1G2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.15■■■□□ 2.58
CMTR1Q8N1G2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.57
CMTR1Q8N1G2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.13■■■□□ 2.57
CMTR1Q8N1G2 MIR762-201ENST00000390236 83 ntBASIC31.13■■■□□ 2.57
CMTR1Q8N1G2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CMTR1Q8N1G2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CMTR1Q8N1G2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CMTR1Q8N1G2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CMTR1Q8N1G2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CMTR1Q8N1G2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms