Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.9■■■□□ 2.7
RAB11FIP4Q86YS3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RAB11FIP4Q86YS3 AC136428.2-201ENST00000563187 214 ntBASIC31.89■■■□□ 2.7
RAB11FIP4Q86YS3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
RAB11FIP4Q86YS3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
RAB11FIP4Q86YS3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.88■■■□□ 2.69
RAB11FIP4Q86YS3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.88■■■□□ 2.69
RAB11FIP4Q86YS3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RAB11FIP4Q86YS3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RAB11FIP4Q86YS3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
RAB11FIP4Q86YS3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.86■■■□□ 2.69
RAB11FIP4Q86YS3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
RAB11FIP4Q86YS3 AC097358.2-201ENST00000607541 1159 ntBASIC31.86■■■□□ 2.69
RAB11FIP4Q86YS3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.85■■■□□ 2.69
RAB11FIP4Q86YS3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.85■■■□□ 2.69
RAB11FIP4Q86YS3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.84■■■□□ 2.69
RAB11FIP4Q86YS3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
RAB11FIP4Q86YS3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RAB11FIP4Q86YS3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
RAB11FIP4Q86YS3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RAB11FIP4Q86YS3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RAB11FIP4Q86YS3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RAB11FIP4Q86YS3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
RAB11FIP4Q86YS3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RAB11FIP4Q86YS3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RAB11FIP4Q86YS3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.74■■■□□ 2.67
RAB11FIP4Q86YS3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
RAB11FIP4Q86YS3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.73■■■□□ 2.67
RAB11FIP4Q86YS3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.73■■■□□ 2.67
RAB11FIP4Q86YS3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RAB11FIP4Q86YS3 CAHM-201ENST00000604200 896 ntBASIC31.71■■■□□ 2.67
RAB11FIP4Q86YS3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RAB11FIP4Q86YS3 WASH5P-204ENST00000632292 975 ntBASIC31.7■■■□□ 2.67
RAB11FIP4Q86YS3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.67■■■□□ 2.66
RAB11FIP4Q86YS3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RAB11FIP4Q86YS3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.67■■■□□ 2.66
RAB11FIP4Q86YS3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.66■■■□□ 2.66
RAB11FIP4Q86YS3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.63■■■□□ 2.65
RAB11FIP4Q86YS3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RAB11FIP4Q86YS3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RAB11FIP4Q86YS3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RAB11FIP4Q86YS3 AL161658.1-201ENST00000623641 1967 ntBASIC31.62■■■□□ 2.65
RAB11FIP4Q86YS3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RAB11FIP4Q86YS3 AL391121.1-201ENST00000607967 1349 ntBASIC31.61■■■□□ 2.65
RAB11FIP4Q86YS3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RAB11FIP4Q86YS3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.59■■■□□ 2.65
RAB11FIP4Q86YS3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.59■■■□□ 2.65
RAB11FIP4Q86YS3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RAB11FIP4Q86YS3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RAB11FIP4Q86YS3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RAB11FIP4Q86YS3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RAB11FIP4Q86YS3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.57■■■□□ 2.64
RAB11FIP4Q86YS3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RAB11FIP4Q86YS3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
RAB11FIP4Q86YS3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RAB11FIP4Q86YS3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
RAB11FIP4Q86YS3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RAB11FIP4Q86YS3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
RAB11FIP4Q86YS3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.54■■■□□ 2.64
RAB11FIP4Q86YS3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RAB11FIP4Q86YS3 SUZ12P1-203ENST00000578195 985 ntBASIC31.52■■■□□ 2.64
RAB11FIP4Q86YS3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
RAB11FIP4Q86YS3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
RAB11FIP4Q86YS3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.5■■■□□ 2.63
RAB11FIP4Q86YS3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RAB11FIP4Q86YS3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.49■■■□□ 2.63
RAB11FIP4Q86YS3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RAB11FIP4Q86YS3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RAB11FIP4Q86YS3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RAB11FIP4Q86YS3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.48■■■□□ 2.63
RAB11FIP4Q86YS3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAB11FIP4Q86YS3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.47■■■□□ 2.63
RAB11FIP4Q86YS3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAB11FIP4Q86YS3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RAB11FIP4Q86YS3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
RAB11FIP4Q86YS3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
RAB11FIP4Q86YS3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
RAB11FIP4Q86YS3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RAB11FIP4Q86YS3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RAB11FIP4Q86YS3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RAB11FIP4Q86YS3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.41■■■□□ 2.62
RAB11FIP4Q86YS3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.4■■■□□ 2.62
RAB11FIP4Q86YS3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RAB11FIP4Q86YS3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC31.39■■■□□ 2.62
RAB11FIP4Q86YS3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB11FIP4Q86YS3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RAB11FIP4Q86YS3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB11FIP4Q86YS3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RAB11FIP4Q86YS3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAB11FIP4Q86YS3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAB11FIP4Q86YS3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RAB11FIP4Q86YS3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
RAB11FIP4Q86YS3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RAB11FIP4Q86YS3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.34■■■□□ 2.61
RAB11FIP4Q86YS3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.34■■■□□ 2.61
RAB11FIP4Q86YS3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAB11FIP4Q86YS3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.32■■■□□ 2.6
RAB11FIP4Q86YS3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
RAB11FIP4Q86YS3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RAB11FIP4Q86YS3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms