Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
ZNF546Q86UE3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
ZNF546Q86UE3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
ZNF546Q86UE3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZNF546Q86UE3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ZNF546Q86UE3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ZNF546Q86UE3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.57■■□□□ 1.2
ZNF546Q86UE3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF546Q86UE3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF546Q86UE3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ZNF546Q86UE3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF546Q86UE3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF546Q86UE3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF546Q86UE3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF546Q86UE3 AC120057.4-201ENST00000624722 1615 ntBASIC22.55■■□□□ 1.2
ZNF546Q86UE3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ZNF546Q86UE3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ZNF546Q86UE3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.54■■□□□ 1.2
ZNF546Q86UE3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
ZNF546Q86UE3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ZNF546Q86UE3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.52■■□□□ 1.2
ZNF546Q86UE3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF546Q86UE3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ZNF546Q86UE3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
ZNF546Q86UE3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF546Q86UE3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZNF546Q86UE3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ZNF546Q86UE3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
ZNF546Q86UE3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF546Q86UE3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZNF546Q86UE3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZNF546Q86UE3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
ZNF546Q86UE3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZNF546Q86UE3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.43■■□□□ 1.18
ZNF546Q86UE3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.42■■□□□ 1.18
ZNF546Q86UE3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZNF546Q86UE3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZNF546Q86UE3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZNF546Q86UE3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZNF546Q86UE3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.41■■□□□ 1.18
ZNF546Q86UE3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZNF546Q86UE3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
ZNF546Q86UE3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
ZNF546Q86UE3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.39■■□□□ 1.18
ZNF546Q86UE3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZNF546Q86UE3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.39■■□□□ 1.17
ZNF546Q86UE3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.38■■□□□ 1.17
ZNF546Q86UE3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZNF546Q86UE3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZNF546Q86UE3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZNF546Q86UE3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZNF546Q86UE3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
ZNF546Q86UE3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZNF546Q86UE3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.36■■□□□ 1.17
ZNF546Q86UE3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZNF546Q86UE3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZNF546Q86UE3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.35■■□□□ 1.17
ZNF546Q86UE3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZNF546Q86UE3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.34■■□□□ 1.17
ZNF546Q86UE3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZNF546Q86UE3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZNF546Q86UE3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZNF546Q86UE3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.32■■□□□ 1.16
ZNF546Q86UE3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.31■■□□□ 1.16
ZNF546Q86UE3 AC142086.6-201ENST00000621154 1765 ntBASIC22.31■■□□□ 1.16
ZNF546Q86UE3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZNF546Q86UE3 AC135731.1-201ENST00000569415 2548 ntBASIC22.31■■□□□ 1.16
ZNF546Q86UE3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZNF546Q86UE3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZNF546Q86UE3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
ZNF546Q86UE3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZNF546Q86UE3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ZNF546Q86UE3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZNF546Q86UE3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ZNF546Q86UE3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZNF546Q86UE3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ZNF546Q86UE3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZNF546Q86UE3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZNF546Q86UE3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.26■■□□□ 1.15
ZNF546Q86UE3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF546Q86UE3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.25■■□□□ 1.15
ZNF546Q86UE3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF546Q86UE3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF546Q86UE3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF546Q86UE3 ST7-AS1-201ENST00000456775 1889 ntBASIC22.24■■□□□ 1.15
ZNF546Q86UE3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF546Q86UE3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ZNF546Q86UE3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF546Q86UE3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF546Q86UE3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ZNF546Q86UE3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.22■■□□□ 1.15
ZNF546Q86UE3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF546Q86UE3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF546Q86UE3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.22■■□□□ 1.15
ZNF546Q86UE3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ZNF546Q86UE3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZNF546Q86UE3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
ZNF546Q86UE3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ZNF546Q86UE3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZNF546Q86UE3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms