Protein–RNA interactions for Protein: P61018

RAB4B, Ras-related protein Rab-4B, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4BP61018 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB4BP61018 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB4BP61018 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB4BP61018 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB4BP61018 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB4BP61018 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB4BP61018 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB4BP61018 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB4BP61018 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB4BP61018 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB4BP61018 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAB4BP61018 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB4BP61018 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB4BP61018 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB4BP61018 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB4BP61018 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB4BP61018 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB4BP61018 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.87■□□□□ 0.93
RAB4BP61018 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAB4BP61018 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.85■□□□□ 0.93
RAB4BP61018 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB4BP61018 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RAB4BP61018 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAB4BP61018 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.83■□□□□ 0.93
RAB4BP61018 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAB4BP61018 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB4BP61018 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB4BP61018 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB4BP61018 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB4BP61018 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB4BP61018 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB4BP61018 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB4BP61018 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB4BP61018 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB4BP61018 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB4BP61018 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB4BP61018 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC20.77■□□□□ 0.92
RAB4BP61018 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB4BP61018 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB4BP61018 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB4BP61018 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB4BP61018 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB4BP61018 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB4BP61018 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB4BP61018 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB4BP61018 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB4BP61018 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB4BP61018 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RAB4BP61018 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB4BP61018 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB4BP61018 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB4BP61018 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB4BP61018 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB4BP61018 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB4BP61018 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB4BP61018 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB4BP61018 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB4BP61018 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB4BP61018 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB4BP61018 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB4BP61018 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB4BP61018 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB4BP61018 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB4BP61018 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB4BP61018 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB4BP61018 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB4BP61018 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB4BP61018 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RAB4BP61018 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB4BP61018 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB4BP61018 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
RAB4BP61018 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RAB4BP61018 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB4BP61018 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB4BP61018 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB4BP61018 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB4BP61018 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB4BP61018 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB4BP61018 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB4BP61018 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RAB4BP61018 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB4BP61018 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RAB4BP61018 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB4BP61018 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB4BP61018 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB4BP61018 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB4BP61018 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB4BP61018 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RAB4BP61018 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB4BP61018 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.6■□□□□ 0.89
RAB4BP61018 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB4BP61018 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB4BP61018 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB4BP61018 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB4BP61018 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
RAB4BP61018 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB4BP61018 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB4BP61018 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB4BP61018 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RAB4BP61018 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms