Protein–RNA interactions for Protein: P27482

CALML3, Calmodulin-like protein 3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALML3P27482 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CALML3P27482 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CALML3P27482 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CALML3P27482 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CALML3P27482 AC120057.4-201ENST00000624722 1615 ntBASIC31.54■■■□□ 2.64
CALML3P27482 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CALML3P27482 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CALML3P27482 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CALML3P27482 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CALML3P27482 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.52■■■□□ 2.64
CALML3P27482 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CALML3P27482 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CALML3P27482 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CALML3P27482 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CALML3P27482 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
CALML3P27482 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CALML3P27482 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.49■■■□□ 2.63
CALML3P27482 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CALML3P27482 AL162393.1-201ENST00000437852 946 ntBASIC31.47■■■□□ 2.63
CALML3P27482 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CALML3P27482 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CALML3P27482 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.46■■■□□ 2.63
CALML3P27482 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CALML3P27482 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CALML3P27482 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CALML3P27482 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CALML3P27482 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.45■■■□□ 2.63
CALML3P27482 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
CALML3P27482 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.44■■■□□ 2.62
CALML3P27482 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CALML3P27482 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.44■■■□□ 2.62
CALML3P27482 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CALML3P27482 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CALML3P27482 AP006261.1-201ENST00000584783 668 ntBASIC31.42■■■□□ 2.62
CALML3P27482 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CALML3P27482 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CALML3P27482 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CALML3P27482 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CALML3P27482 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.4■■■□□ 2.62
CALML3P27482 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CALML3P27482 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CALML3P27482 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CALML3P27482 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CALML3P27482 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.34■■■□□ 2.61
CALML3P27482 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CALML3P27482 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CALML3P27482 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CALML3P27482 WASH5P-204ENST00000632292 975 ntBASIC31.31■■■□□ 2.6
CALML3P27482 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.31■■■□□ 2.6
CALML3P27482 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CALML3P27482 MIR762-201ENST00000390236 83 ntBASIC31.28■■■□□ 2.6
CALML3P27482 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CALML3P27482 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.28■■■□□ 2.6
CALML3P27482 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CALML3P27482 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CALML3P27482 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
CALML3P27482 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CALML3P27482 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.25■■■□□ 2.59
CALML3P27482 MIR3665-201ENST00000578708 105 ntBASIC31.25■■■□□ 2.59
CALML3P27482 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.25■■■□□ 2.59
CALML3P27482 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CALML3P27482 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CALML3P27482 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CALML3P27482 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CALML3P27482 DUX4L28-201ENST00000623687 678 ntBASIC31.21■■■□□ 2.59
CALML3P27482 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CALML3P27482 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CALML3P27482 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
CALML3P27482 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CALML3P27482 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CALML3P27482 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CALML3P27482 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.18■■■□□ 2.58
CALML3P27482 AC005559.1-201ENST00000589661 871 ntBASIC31.18■■■□□ 2.58
CALML3P27482 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.18■■■□□ 2.58
CALML3P27482 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
CALML3P27482 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CALML3P27482 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.14■■■□□ 2.58
CALML3P27482 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CALML3P27482 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.13■■■□□ 2.57
CALML3P27482 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.13■■■□□ 2.57
CALML3P27482 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
CALML3P27482 AC087741.3-201ENST00000624270 1347 ntBASIC31.12■■■□□ 2.57
CALML3P27482 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CALML3P27482 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CALML3P27482 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CALML3P27482 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.08■■■□□ 2.57
CALML3P27482 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.57
CALML3P27482 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CALML3P27482 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CALML3P27482 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.06■■■□□ 2.56
CALML3P27482 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.06■■■□□ 2.56
CALML3P27482 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CALML3P27482 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.04■■■□□ 2.56
CALML3P27482 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CALML3P27482 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.04■■■□□ 2.56
CALML3P27482 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
CALML3P27482 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CALML3P27482 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CALML3P27482 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CALML3P27482 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms