Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
TDP2O95551 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TDP2O95551 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
TDP2O95551 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TDP2O95551 AL391121.1-201ENST00000607967 1349 ntBASIC30.91■■■□□ 2.54
TDP2O95551 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
TDP2O95551 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
TDP2O95551 WASH5P-204ENST00000632292 975 ntBASIC30.9■■■□□ 2.54
TDP2O95551 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TDP2O95551 SUZ12P1-203ENST00000578195 985 ntBASIC30.88■■■□□ 2.53
TDP2O95551 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
TDP2O95551 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
TDP2O95551 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
TDP2O95551 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TDP2O95551 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TDP2O95551 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TDP2O95551 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TDP2O95551 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.83■■■□□ 2.53
TDP2O95551 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
TDP2O95551 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
TDP2O95551 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TDP2O95551 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TDP2O95551 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TDP2O95551 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.8■■■□□ 2.52
TDP2O95551 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TDP2O95551 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TDP2O95551 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TDP2O95551 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.78■■■□□ 2.52
TDP2O95551 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TDP2O95551 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.76■■■□□ 2.51
TDP2O95551 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
TDP2O95551 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TDP2O95551 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
TDP2O95551 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TDP2O95551 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
TDP2O95551 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TDP2O95551 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.7■■■□□ 2.51
TDP2O95551 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TDP2O95551 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
TDP2O95551 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TDP2O95551 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.68■■■□□ 2.5
TDP2O95551 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TDP2O95551 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDP2O95551 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDP2O95551 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
TDP2O95551 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.65■■■□□ 2.5
TDP2O95551 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.65■■■□□ 2.5
TDP2O95551 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
TDP2O95551 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.63■■■□□ 2.49
TDP2O95551 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TDP2O95551 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TDP2O95551 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
TDP2O95551 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
TDP2O95551 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
TDP2O95551 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TDP2O95551 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.56■■■□□ 2.48
TDP2O95551 AL161658.1-201ENST00000623641 1967 ntBASIC30.55■■■□□ 2.48
TDP2O95551 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.55■■■□□ 2.48
TDP2O95551 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
TDP2O95551 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TDP2O95551 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TDP2O95551 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
TDP2O95551 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
TDP2O95551 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
TDP2O95551 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.51■■■□□ 2.47
TDP2O95551 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TDP2O95551 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
TDP2O95551 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TDP2O95551 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TDP2O95551 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TDP2O95551 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TDP2O95551 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
TDP2O95551 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TDP2O95551 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.47■■■□□ 2.47
TDP2O95551 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
TDP2O95551 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.45■■■□□ 2.47
TDP2O95551 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.45■■■□□ 2.47
TDP2O95551 MIR762-201ENST00000390236 83 ntBASIC30.45■■■□□ 2.47
TDP2O95551 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
TDP2O95551 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.45■■■□□ 2.46
TDP2O95551 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TDP2O95551 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
TDP2O95551 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TDP2O95551 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.44■■■□□ 2.46
TDP2O95551 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
TDP2O95551 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TDP2O95551 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
TDP2O95551 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.42■■■□□ 2.46
TDP2O95551 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TDP2O95551 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
TDP2O95551 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
TDP2O95551 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.41■■■□□ 2.46
TDP2O95551 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.41■■■□□ 2.46
TDP2O95551 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TDP2O95551 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.4■■■□□ 2.46
TDP2O95551 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
TDP2O95551 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
TDP2O95551 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.4■■■□□ 2.46
TDP2O95551 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TDP2O95551 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.38■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms