Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCNT1O60563 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CCNT1O60563 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.92■■■□□ 2.54
CCNT1O60563 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CCNT1O60563 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCNT1O60563 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCNT1O60563 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CCNT1O60563 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
CCNT1O60563 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
CCNT1O60563 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.87■■■□□ 2.53
CCNT1O60563 WASH5P-204ENST00000632292 975 ntBASIC30.87■■■□□ 2.53
CCNT1O60563 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
CCNT1O60563 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CCNT1O60563 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CCNT1O60563 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
CCNT1O60563 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
CCNT1O60563 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.83■■■□□ 2.53
CCNT1O60563 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CCNT1O60563 CAHM-201ENST00000604200 896 ntBASIC30.82■■■□□ 2.52
CCNT1O60563 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCNT1O60563 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.81■■■□□ 2.52
CCNT1O60563 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
CCNT1O60563 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCNT1O60563 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.78■■■□□ 2.52
CCNT1O60563 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CCNT1O60563 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.78■■■□□ 2.52
CCNT1O60563 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CCNT1O60563 AL391121.1-201ENST00000607967 1349 ntBASIC30.77■■■□□ 2.52
CCNT1O60563 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.77■■■□□ 2.52
CCNT1O60563 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCNT1O60563 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCNT1O60563 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCNT1O60563 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCNT1O60563 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCNT1O60563 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCNT1O60563 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCNT1O60563 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCNT1O60563 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.72■■■□□ 2.51
CCNT1O60563 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCNT1O60563 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCNT1O60563 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.7■■■□□ 2.51
CCNT1O60563 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCNT1O60563 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.69■■■□□ 2.5
CCNT1O60563 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.67■■■□□ 2.5
CCNT1O60563 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCNT1O60563 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCNT1O60563 SUZ12P1-203ENST00000578195 985 ntBASIC30.65■■■□□ 2.5
CCNT1O60563 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
CCNT1O60563 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCNT1O60563 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCNT1O60563 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.63■■■□□ 2.49
CCNT1O60563 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
CCNT1O60563 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CCNT1O60563 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCNT1O60563 AL161658.1-201ENST00000623641 1967 ntBASIC30.61■■■□□ 2.49
CCNT1O60563 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.6■■■□□ 2.49
CCNT1O60563 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCNT1O60563 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.6■■■□□ 2.49
CCNT1O60563 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCNT1O60563 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.6■■■□□ 2.49
CCNT1O60563 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCNT1O60563 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCNT1O60563 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCNT1O60563 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.57■■■□□ 2.48
CCNT1O60563 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.57■■■□□ 2.48
CCNT1O60563 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CCNT1O60563 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCNT1O60563 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CCNT1O60563 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.55■■■□□ 2.48
CCNT1O60563 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CCNT1O60563 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.54■■■□□ 2.48
CCNT1O60563 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
CCNT1O60563 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CCNT1O60563 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCNT1O60563 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CCNT1O60563 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCNT1O60563 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CCNT1O60563 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.5■■■□□ 2.47
CCNT1O60563 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CCNT1O60563 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCNT1O60563 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.48■■■□□ 2.47
CCNT1O60563 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCNT1O60563 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.47■■■□□ 2.47
CCNT1O60563 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.47■■■□□ 2.47
CCNT1O60563 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCNT1O60563 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCNT1O60563 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CCNT1O60563 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.45■■■□□ 2.47
CCNT1O60563 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCNT1O60563 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.45■■■□□ 2.47
CCNT1O60563 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CCNT1O60563 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CCNT1O60563 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CCNT1O60563 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
CCNT1O60563 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCNT1O60563 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CCNT1O60563 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCNT1O60563 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCNT1O60563 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.42■■■□□ 2.46
CCNT1O60563 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms