Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC135731.1-201ENST00000569415 2548 ntBASIC15.59■□□□□ 0.09
CHKB-CPT1BH3BT56 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHKB-CPT1BH3BT56 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHKB-CPT1BH3BT56 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHKB-CPT1BH3BT56 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHKB-CPT1BH3BT56 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHKB-CPT1BH3BT56 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHKB-CPT1BH3BT56 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHKB-CPT1BH3BT56 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHKB-CPT1BH3BT56 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHKB-CPT1BH3BT56 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHKB-CPT1BH3BT56 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHKB-CPT1BH3BT56 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHKB-CPT1BH3BT56 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHKB-CPT1BH3BT56 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CHKB-CPT1BH3BT56 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.52■□□□□ 0.08
CHKB-CPT1BH3BT56 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHKB-CPT1BH3BT56 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHKB-CPT1BH3BT56 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC15.51■□□□□ 0.07
CHKB-CPT1BH3BT56 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CHKB-CPT1BH3BT56 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CHKB-CPT1BH3BT56 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CHKB-CPT1BH3BT56 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHKB-CPT1BH3BT56 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CHKB-CPT1BH3BT56 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHKB-CPT1BH3BT56 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHKB-CPT1BH3BT56 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CHKB-CPT1BH3BT56 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CHKB-CPT1BH3BT56 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC15.47■□□□□ 0.07
CHKB-CPT1BH3BT56 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CHKB-CPT1BH3BT56 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CHKB-CPT1BH3BT56 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CHKB-CPT1BH3BT56 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CHKB-CPT1BH3BT56 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHKB-CPT1BH3BT56 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHKB-CPT1BH3BT56 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHKB-CPT1BH3BT56 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC15.45■□□□□ 0.06
CHKB-CPT1BH3BT56 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CHKB-CPT1BH3BT56 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CHKB-CPT1BH3BT56 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CHKB-CPT1BH3BT56 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHKB-CPT1BH3BT56 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CHKB-CPT1BH3BT56 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHKB-CPT1BH3BT56 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CHKB-CPT1BH3BT56 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CHKB-CPT1BH3BT56 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC15.4■□□□□ 0.06
CHKB-CPT1BH3BT56 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHKB-CPT1BH3BT56 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHKB-CPT1BH3BT56 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CHKB-CPT1BH3BT56 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHKB-CPT1BH3BT56 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.38■□□□□ 0.05
CHKB-CPT1BH3BT56 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHKB-CPT1BH3BT56 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC15.38■□□□□ 0.05
CHKB-CPT1BH3BT56 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHKB-CPT1BH3BT56 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC15.38■□□□□ 0.05
CHKB-CPT1BH3BT56 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHKB-CPT1BH3BT56 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CHKB-CPT1BH3BT56 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHKB-CPT1BH3BT56 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CHKB-CPT1BH3BT56 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHKB-CPT1BH3BT56 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHKB-CPT1BH3BT56 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHKB-CPT1BH3BT56 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CHKB-CPT1BH3BT56 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHKB-CPT1BH3BT56 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHKB-CPT1BH3BT56 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHKB-CPT1BH3BT56 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHKB-CPT1BH3BT56 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHKB-CPT1BH3BT56 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
CHKB-CPT1BH3BT56 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CHKB-CPT1BH3BT56 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHKB-CPT1BH3BT56 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHKB-CPT1BH3BT56 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.31■□□□□ 0.04
CHKB-CPT1BH3BT56 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHKB-CPT1BH3BT56 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHKB-CPT1BH3BT56 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHKB-CPT1BH3BT56 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHKB-CPT1BH3BT56 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHKB-CPT1BH3BT56 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CHKB-CPT1BH3BT56 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC15.27■□□□□ 0.04
CHKB-CPT1BH3BT56 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHKB-CPT1BH3BT56 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC15.26■□□□□ 0.03
CHKB-CPT1BH3BT56 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHKB-CPT1BH3BT56 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHKB-CPT1BH3BT56 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC15.26■□□□□ 0.03
CHKB-CPT1BH3BT56 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHKB-CPT1BH3BT56 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHKB-CPT1BH3BT56 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHKB-CPT1BH3BT56 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHKB-CPT1BH3BT56 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHKB-CPT1BH3BT56 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC15.25■□□□□ 0.03
CHKB-CPT1BH3BT56 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC15.24■□□□□ 0.03
CHKB-CPT1BH3BT56 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHKB-CPT1BH3BT56 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms