Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC33.07■■■□□ 2.88
TMEM88BA6NKF7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC33.07■■■□□ 2.88
TMEM88BA6NKF7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
TMEM88BA6NKF7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC33.05■■■□□ 2.88
TMEM88BA6NKF7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
TMEM88BA6NKF7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.01■■■□□ 2.87
TMEM88BA6NKF7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33■■■□□ 2.87
TMEM88BA6NKF7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
TMEM88BA6NKF7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
TMEM88BA6NKF7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
TMEM88BA6NKF7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
TMEM88BA6NKF7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
TMEM88BA6NKF7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.93■■■□□ 2.86
TMEM88BA6NKF7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
TMEM88BA6NKF7 AC016575.1-201ENST00000607026 382 ntBASIC32.92■■■□□ 2.86
TMEM88BA6NKF7 MIR3648-2-201ENST00000581792 180 ntBASIC32.91■■■□□ 2.86
TMEM88BA6NKF7 MIR3648-1-201ENST00000615959 180 ntBASIC32.91■■■□□ 2.86
TMEM88BA6NKF7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC32.88■■■□□ 2.85
TMEM88BA6NKF7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.88■■■□□ 2.85
TMEM88BA6NKF7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.87■■■□□ 2.85
TMEM88BA6NKF7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
TMEM88BA6NKF7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.86■■■□□ 2.85
TMEM88BA6NKF7 AC021231.2-201ENST00000594613 730 ntBASIC32.86■■■□□ 2.85
TMEM88BA6NKF7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
TMEM88BA6NKF7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.85■■■□□ 2.85
TMEM88BA6NKF7 ABHD17AP3-201ENST00000503096 1137 ntBASIC32.82■■■□□ 2.84
TMEM88BA6NKF7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
TMEM88BA6NKF7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
TMEM88BA6NKF7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
TMEM88BA6NKF7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
TMEM88BA6NKF7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.76■■■□□ 2.83
TMEM88BA6NKF7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.75■■■□□ 2.83
TMEM88BA6NKF7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.74■■■□□ 2.83
TMEM88BA6NKF7 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
TMEM88BA6NKF7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
TMEM88BA6NKF7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TMEM88BA6NKF7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC32.71■■■□□ 2.83
TMEM88BA6NKF7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.71■■■□□ 2.83
TMEM88BA6NKF7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
TMEM88BA6NKF7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
TMEM88BA6NKF7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.7■■■□□ 2.83
TMEM88BA6NKF7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.69■■■□□ 2.82
TMEM88BA6NKF7 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.69■■■□□ 2.82
TMEM88BA6NKF7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
TMEM88BA6NKF7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.67■■■□□ 2.82
TMEM88BA6NKF7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.67■■■□□ 2.82
TMEM88BA6NKF7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.65■■■□□ 2.82
TMEM88BA6NKF7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
TMEM88BA6NKF7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
TMEM88BA6NKF7 CR559946.2-201ENST00000623684 991 ntBASIC32.64■■■□□ 2.82
TMEM88BA6NKF7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
TMEM88BA6NKF7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC32.63■■■□□ 2.81
TMEM88BA6NKF7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
TMEM88BA6NKF7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
TMEM88BA6NKF7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
TMEM88BA6NKF7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
TMEM88BA6NKF7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
TMEM88BA6NKF7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
TMEM88BA6NKF7 DUX4L11-201ENST00000611504 1267 ntBASIC32.6■■■□□ 2.81
TMEM88BA6NKF7 DUX4L12-201ENST00000614593 1267 ntBASIC32.6■■■□□ 2.81
TMEM88BA6NKF7 DUX4L14-201ENST00000621227 1267 ntBASIC32.6■■■□□ 2.81
TMEM88BA6NKF7 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TMEM88BA6NKF7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TMEM88BA6NKF7 WASH5P-204ENST00000632292 975 ntBASIC32.57■■■□□ 2.8
TMEM88BA6NKF7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
TMEM88BA6NKF7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.56■■■□□ 2.8
TMEM88BA6NKF7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
TMEM88BA6NKF7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
TMEM88BA6NKF7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
TMEM88BA6NKF7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
TMEM88BA6NKF7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
TMEM88BA6NKF7 LINC01971-201ENST00000617888 1048 ntBASIC32.53■■■□□ 2.8
TMEM88BA6NKF7 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.53■■■□□ 2.8
TMEM88BA6NKF7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC32.52■■■□□ 2.8
TMEM88BA6NKF7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
TMEM88BA6NKF7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.47■■■□□ 2.79
TMEM88BA6NKF7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
TMEM88BA6NKF7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.47■■■□□ 2.79
TMEM88BA6NKF7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
TMEM88BA6NKF7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.46■■■□□ 2.79
TMEM88BA6NKF7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
TMEM88BA6NKF7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
TMEM88BA6NKF7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
TMEM88BA6NKF7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
TMEM88BA6NKF7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.45■■■□□ 2.79
TMEM88BA6NKF7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.45■■■□□ 2.79
TMEM88BA6NKF7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
TMEM88BA6NKF7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
TMEM88BA6NKF7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.43■■■□□ 2.78
TMEM88BA6NKF7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.43■■■□□ 2.78
TMEM88BA6NKF7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.42■■■□□ 2.78
TMEM88BA6NKF7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TMEM88BA6NKF7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.41■■■□□ 2.78
TMEM88BA6NKF7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
TMEM88BA6NKF7 AC108673.1-201ENST00000510422 1159 ntBASIC32.4■■■□□ 2.78
TMEM88BA6NKF7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
TMEM88BA6NKF7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TMEM88BA6NKF7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC32.37■■■□□ 2.77
TMEM88BA6NKF7 MIR6090-201ENST00000622481 60 ntBASIC32.37■■■□□ 2.77
TMEM88BA6NKF7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms