Protein–RNA interactions for Protein: A0A1B0GVY4

SMIM31, Small integral membrane protein 31, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM31A0A1B0GVY4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMIM31A0A1B0GVY4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.26■■□□□ 1.63
SMIM31A0A1B0GVY4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM31A0A1B0GVY4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM31A0A1B0GVY4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SMIM31A0A1B0GVY4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.24■■□□□ 1.63
SMIM31A0A1B0GVY4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMIM31A0A1B0GVY4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMIM31A0A1B0GVY4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM31A0A1B0GVY4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM31A0A1B0GVY4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM31A0A1B0GVY4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM31A0A1B0GVY4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM31A0A1B0GVY4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM31A0A1B0GVY4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SMIM31A0A1B0GVY4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
SMIM31A0A1B0GVY4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM31A0A1B0GVY4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.19■■□□□ 1.62
SMIM31A0A1B0GVY4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM31A0A1B0GVY4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM31A0A1B0GVY4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.18■■□□□ 1.62
SMIM31A0A1B0GVY4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM31A0A1B0GVY4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.17■■□□□ 1.62
SMIM31A0A1B0GVY4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM31A0A1B0GVY4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM31A0A1B0GVY4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMIM31A0A1B0GVY4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SMIM31A0A1B0GVY4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.14■■□□□ 1.62
SMIM31A0A1B0GVY4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.12■■□□□ 1.61
SMIM31A0A1B0GVY4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMIM31A0A1B0GVY4 AC142086.6-201ENST00000621154 1765 ntBASIC25.12■■□□□ 1.61
SMIM31A0A1B0GVY4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.12■■□□□ 1.61
SMIM31A0A1B0GVY4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.12■■□□□ 1.61
SMIM31A0A1B0GVY4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMIM31A0A1B0GVY4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
SMIM31A0A1B0GVY4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMIM31A0A1B0GVY4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SMIM31A0A1B0GVY4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMIM31A0A1B0GVY4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.1■■□□□ 1.61
SMIM31A0A1B0GVY4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMIM31A0A1B0GVY4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMIM31A0A1B0GVY4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.08■■□□□ 1.6
SMIM31A0A1B0GVY4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
SMIM31A0A1B0GVY4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SMIM31A0A1B0GVY4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMIM31A0A1B0GVY4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.05■■□□□ 1.6
SMIM31A0A1B0GVY4 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMIM31A0A1B0GVY4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.04■■□□□ 1.6
SMIM31A0A1B0GVY4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SMIM31A0A1B0GVY4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMIM31A0A1B0GVY4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.03■■□□□ 1.6
SMIM31A0A1B0GVY4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SMIM31A0A1B0GVY4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMIM31A0A1B0GVY4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMIM31A0A1B0GVY4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.02■■□□□ 1.6
SMIM31A0A1B0GVY4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMIM31A0A1B0GVY4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMIM31A0A1B0GVY4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMIM31A0A1B0GVY4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMIM31A0A1B0GVY4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMIM31A0A1B0GVY4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMIM31A0A1B0GVY4 AC120057.4-201ENST00000624722 1615 ntBASIC25■■□□□ 1.59
SMIM31A0A1B0GVY4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
SMIM31A0A1B0GVY4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SMIM31A0A1B0GVY4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.99■■□□□ 1.59
SMIM31A0A1B0GVY4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SMIM31A0A1B0GVY4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SMIM31A0A1B0GVY4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SMIM31A0A1B0GVY4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMIM31A0A1B0GVY4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SMIM31A0A1B0GVY4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMIM31A0A1B0GVY4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SMIM31A0A1B0GVY4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.95■■□□□ 1.58
SMIM31A0A1B0GVY4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
SMIM31A0A1B0GVY4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMIM31A0A1B0GVY4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMIM31A0A1B0GVY4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SMIM31A0A1B0GVY4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SMIM31A0A1B0GVY4 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC24.92■■□□□ 1.58
SMIM31A0A1B0GVY4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.91■■□□□ 1.58
SMIM31A0A1B0GVY4 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SMIM31A0A1B0GVY4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SMIM31A0A1B0GVY4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
SMIM31A0A1B0GVY4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
SMIM31A0A1B0GVY4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
SMIM31A0A1B0GVY4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.89■■□□□ 1.57
SMIM31A0A1B0GVY4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMIM31A0A1B0GVY4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SMIM31A0A1B0GVY4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
SMIM31A0A1B0GVY4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMIM31A0A1B0GVY4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SMIM31A0A1B0GVY4 AL121749.1-202ENST00000609313 2153 ntBASIC24.86■■□□□ 1.57
SMIM31A0A1B0GVY4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
SMIM31A0A1B0GVY4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
SMIM31A0A1B0GVY4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMIM31A0A1B0GVY4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SMIM31A0A1B0GVY4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMIM31A0A1B0GVY4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
SMIM31A0A1B0GVY4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMIM31A0A1B0GVY4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms