Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A2P08123 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.95■■□□□ 1.42
COL1A2P08123 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.94■■□□□ 1.42
COL1A2P08123 OR7E47P-201ENST00000546390 1422 ntBASIC23.94■■□□□ 1.42
COL1A2P08123 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A2P08123 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.94■■□□□ 1.42
COL1A2P08123 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A2P08123 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
COL1A2P08123 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
COL1A2P08123 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A2P08123 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.93■■□□□ 1.42
COL1A2P08123 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.93■■□□□ 1.42
COL1A2P08123 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.93■■□□□ 1.42
COL1A2P08123 AL034346.1-201ENST00000568244 1277 ntBASIC23.93■■□□□ 1.42
COL1A2P08123 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.93■■□□□ 1.42
COL1A2P08123 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A2P08123 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL1A2P08123 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A2P08123 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A2P08123 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.93■■□□□ 1.42
COL1A2P08123 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL1A2P08123 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL1A2P08123 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A2P08123 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A2P08123 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.92■■□□□ 1.42
COL1A2P08123 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
COL1A2P08123 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.92■■□□□ 1.42
COL1A2P08123 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
COL1A2P08123 AC055733.4-201ENST00000638462 1354 ntBASIC23.92■■□□□ 1.42
COL1A2P08123 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A2P08123 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.91■■□□□ 1.42
COL1A2P08123 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A2P08123 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A2P08123 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
COL1A2P08123 LINC00526-201ENST00000581067 1875 ntBASIC23.91■■□□□ 1.42
COL1A2P08123 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A2P08123 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.91■■□□□ 1.42
COL1A2P08123 AP004607.7-201ENST00000527152 1677 ntBASIC23.91■■□□□ 1.42
COL1A2P08123 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.91■■□□□ 1.42
COL1A2P08123 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.91■■□□□ 1.42
COL1A2P08123 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A2P08123 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.91■■□□□ 1.42
COL1A2P08123 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.91■■□□□ 1.42
COL1A2P08123 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A2P08123 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
COL1A2P08123 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A2P08123 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A2P08123 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A2P08123 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A2P08123 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.9■■□□□ 1.42
COL1A2P08123 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.9■■□□□ 1.42
COL1A2P08123 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.9■■□□□ 1.42
COL1A2P08123 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.89■■□□□ 1.42
COL1A2P08123 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
COL1A2P08123 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.89■■□□□ 1.42
COL1A2P08123 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL1A2P08123 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL1A2P08123 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL1A2P08123 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL1A2P08123 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.89■■□□□ 1.41
COL1A2P08123 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.89■■□□□ 1.41
COL1A2P08123 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL1A2P08123 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.89■■□□□ 1.41
COL1A2P08123 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.89■■□□□ 1.41
COL1A2P08123 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.89■■□□□ 1.41
COL1A2P08123 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL1A2P08123 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
COL1A2P08123 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.88■■□□□ 1.41
COL1A2P08123 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A2P08123 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A2P08123 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A2P08123 DUSP8P5-201ENST00000422884 1815 ntBASIC23.88■■□□□ 1.41
COL1A2P08123 AC087742.1-201ENST00000575880 1738 ntBASIC23.88■■□□□ 1.41
COL1A2P08123 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A2P08123 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
COL1A2P08123 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A2P08123 KRT18P11-201ENST00000435214 1283 ntBASIC23.88■■□□□ 1.41
COL1A2P08123 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.88■■□□□ 1.41
COL1A2P08123 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL1A2P08123 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A2P08123 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A2P08123 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A2P08123 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.87■■□□□ 1.41
COL1A2P08123 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A2P08123 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A2P08123 AC080038.1-201ENST00000611274 1154 ntBASIC23.87■■□□□ 1.41
COL1A2P08123 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL1A2P08123 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms