Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EFCC1Q9HA90 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.39■■□□□ 1.66
EFCC1Q9HA90 AC012676.1-201ENST00000574705 1949 ntBASIC25.39■■□□□ 1.66
EFCC1Q9HA90 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EFCC1Q9HA90 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
EFCC1Q9HA90 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.39■■□□□ 1.66
EFCC1Q9HA90 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.39■■□□□ 1.65
EFCC1Q9HA90 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
EFCC1Q9HA90 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
EFCC1Q9HA90 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
EFCC1Q9HA90 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.39■■□□□ 1.65
EFCC1Q9HA90 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
EFCC1Q9HA90 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
EFCC1Q9HA90 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 AL138781.1-201ENST00000566567 1274 ntBASIC25.37■■□□□ 1.65
EFCC1Q9HA90 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
EFCC1Q9HA90 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 GUSBP6-202ENST00000438529 1198 ntBASIC25.36■■□□□ 1.65
EFCC1Q9HA90 MFSD11-216ENST00000590393 1141 ntBASIC25.36■■□□□ 1.65
EFCC1Q9HA90 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
EFCC1Q9HA90 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 SLC7A5P2-201ENST00000553010 536 ntBASIC25.35■■□□□ 1.65
EFCC1Q9HA90 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 AC008687.6-201ENST00000596318 630 ntBASIC25.35■■□□□ 1.65
EFCC1Q9HA90 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
EFCC1Q9HA90 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 AC142381.3-201ENST00000568208 1670 ntBASIC25.34■■□□□ 1.65
EFCC1Q9HA90 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
EFCC1Q9HA90 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 SLC29A4P1-201ENST00000398760 971 ntBASIC25.33■■□□□ 1.65
EFCC1Q9HA90 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
EFCC1Q9HA90 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 AC069152.1-201ENST00000438030 544 ntBASIC25.32■■□□□ 1.64
EFCC1Q9HA90 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
EFCC1Q9HA90 AC231657.2-201ENST00000624556 255 ntBASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms