Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ODF4Q2M2E3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ODF4Q2M2E3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ODF4Q2M2E3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.23■□□□□ 0.67
ODF4Q2M2E3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ODF4Q2M2E3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 FP325331.1-202ENST00000623531 1380 ntBASIC19.22■□□□□ 0.67
ODF4Q2M2E3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ODF4Q2M2E3 AC004687.1-201ENST00000579003 1625 ntBASIC19.22■□□□□ 0.67
ODF4Q2M2E3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ODF4Q2M2E3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 AC009086.3-201ENST00000623486 1008 ntBASIC19.2■□□□□ 0.66
ODF4Q2M2E3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ODF4Q2M2E3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.19■□□□□ 0.66
ODF4Q2M2E3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 KRT125P-201ENST00000546827 989 ntBASIC19.19■□□□□ 0.66
ODF4Q2M2E3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 AC092028.1-203ENST00000608262 953 ntBASIC19.19■□□□□ 0.66
ODF4Q2M2E3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ODF4Q2M2E3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ODF4Q2M2E3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms