RNA–Protein interactions for RNA: ENST00000493037.5

RUNDC3B-207, Transcript of RUN domain containing 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNDC3B, Length 2,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-207ENST00000493037 NISCHQ9Y2I1 1504 aa44.71■■■■■ 4.75
RUNDC3B-207ENST00000493037 CCDC180Q9P1Z9 1646 aa38.29■■■■□ 3.72
RUNDC3B-207ENST00000493037 ZCCHC6Q5VYS8 1495 aaKnown RBP37.81■■■■□ 3.64
RUNDC3B-207ENST00000493037 SHROOM4Q9ULL8 1493 aa37.66■■■■□ 3.62
RUNDC3B-207ENST00000493037 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.5
RUNDC3B-207ENST00000493037 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
RUNDC3B-207ENST00000493037 DCAF8L2P0C7V8 631 aa36.75■■■■□ 3.47
RUNDC3B-207ENST00000493037 CHIC1Q5VXU3 224 aa35.91■■■■□ 3.34
RUNDC3B-207ENST00000493037 MYO15BQ96JP2 1530 aa35.88■■■■□ 3.33
RUNDC3B-207ENST00000493037 ABCC9O60706 1549 aa35.68■■■■□ 3.3
RUNDC3B-207ENST00000493037 SCRIBQ14160 1630 aa35.59■■■■□ 3.29
RUNDC3B-207ENST00000493037 NACADO15069 1562 aa35.36■■■■□ 3.25
RUNDC3B-207ENST00000493037 RSF1Q96T23 1441 aaPredicted RBP35.24■■■■□ 3.23
RUNDC3B-207ENST00000493037 RB1CC1Q8TDY2 1594 aa34.95■■■■□ 3.19
RUNDC3B-207ENST00000493037 CECR2Q9BXF3 1484 aa34.73■■■■□ 3.15
RUNDC3B-207ENST00000493037 LOC105371045A0A1W2PR82 267 aa34.69■■■■□ 3.14
RUNDC3B-207ENST00000493037 MROH2BQ7Z745 1585 aa34.66■■■■□ 3.14
RUNDC3B-207ENST00000493037 HRCP23327 699 aa34.55■■■■□ 3.12
RUNDC3B-207ENST00000493037 PCGF6Q9BYE7 350 aa34.52■■■■□ 3.12
RUNDC3B-207ENST00000493037 WIZO95785 1651 aa34.5■■■■□ 3.11
RUNDC3B-207ENST00000493037 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
RUNDC3B-207ENST00000493037 BAZ1AQ9NRL2 1556 aaPredicted RBP34.4■■■■□ 3.1
RUNDC3B-207ENST00000493037 UNC13AQ9UPW8 1703 aa34.26■■■■□ 3.07
RUNDC3B-207ENST00000493037 SMARCA4P51532 1647 aa34.11■■■■□ 3.05
RUNDC3B-207ENST00000493037 TRIM26Q12899 539 aaPredicted RBP34.09■■■■□ 3.05
RUNDC3B-207ENST00000493037 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.04
RUNDC3B-207ENST00000493037 TOP2AP11388 1531 aaKnown RBP34.06■■■■□ 3.04
RUNDC3B-207ENST00000493037 FAM9AQ8IZU1 332 aaPredicted RBP34.03■■■■□ 3.04
RUNDC3B-207ENST00000493037 SMARCA2P51531 1590 aa33.82■■■■□ 3.01
RUNDC3B-207ENST00000493037 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
RUNDC3B-207ENST00000493037 BICRAQ9NZM4 1560 aa33.76■■■■□ 3
RUNDC3B-207ENST00000493037 PPARGC1BQ86YN6 1023 aaKnown RBP33.64■■■□□ 2.98
RUNDC3B-207ENST00000493037 EHMT2Q96KQ7 1210 aa33.6■■■□□ 2.97
RUNDC3B-207ENST00000493037 ABCC8Q09428 1581 aa33.59■■■□□ 2.97
RUNDC3B-207ENST00000493037 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
RUNDC3B-207ENST00000493037 PABPN1Q86U42 306 aaKnown RBP eCLIP33.55■■■□□ 2.96
RUNDC3B-207ENST00000493037 ZEB1P37275 1124 aaPredicted RBP33.38■■■□□ 2.93
RUNDC3B-207ENST00000493037 EEA1Q15075 1411 aa33.28■■■□□ 2.92
RUNDC3B-207ENST00000493037 SOGA1O94964 1423 aa33.22■■■□□ 2.91
RUNDC3B-207ENST00000493037 ATAD2BQ9ULI0 1458 aa33.21■■■□□ 2.91
RUNDC3B-207ENST00000493037 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
RUNDC3B-207ENST00000493037 BAZ1BQ9UIG0 1483 aaKnown RBP33.12■■■□□ 2.89
RUNDC3B-207ENST00000493037 TNIKQ9UKE5 1360 aa33.1■■■□□ 2.89
RUNDC3B-207ENST00000493037 CEP162Q5TB80 1403 aa33.08■■■□□ 2.89
RUNDC3B-207ENST00000493037 CSRNP3Q8WYN3 585 aa33.07■■■□□ 2.89
RUNDC3B-207ENST00000493037 RUSC2Q8N2Y8 1516 aa33.04■■■□□ 2.88
RUNDC3B-207ENST00000493037 SYNJ1O43426 1573 aa32.98■■■□□ 2.87
RUNDC3B-207ENST00000493037 GOLGA3Q08378 1498 aa32.96■■■□□ 2.87
RUNDC3B-207ENST00000493037 UBTFP17480 764 aaKnown RBP32.85■■■□□ 2.85
RUNDC3B-207ENST00000493037 KIF21BO75037 1637 aa32.83■■■□□ 2.85
RUNDC3B-207ENST00000493037 CEP164Q9UPV0 1460 aa32.8■■■□□ 2.84
RUNDC3B-207ENST00000493037 HMGXB3Q12766 1538 aa32.71■■■□□ 2.83
RUNDC3B-207ENST00000493037 TOP2BQ02880 1626 aa32.68■■■□□ 2.82
RUNDC3B-207ENST00000493037 NCAPD3P42695 1498 aa32.64■■■□□ 2.82
RUNDC3B-207ENST00000493037 BIVM-ERCC5R4GMW8 1640 aa32.62■■■□□ 2.81
RUNDC3B-207ENST00000493037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.59■■■□□ 2.81
RUNDC3B-207ENST00000493037 CCER1Q8TC90 406 aaPredicted RBP32.58■■■□□ 2.81
RUNDC3B-207ENST00000493037 TTBK1Q5TCY1 1321 aaPredicted RBP32.52■■■□□ 2.8
RUNDC3B-207ENST00000493037 CLIP1P30622 1438 aa32.51■■■□□ 2.79
RUNDC3B-207ENST00000493037 RAPGEF2Q9Y4G8 1499 aa32.46■■■□□ 2.79
RUNDC3B-207ENST00000493037 VPS8Q8N3P4 1428 aa32.39■■■□□ 2.78
RUNDC3B-207ENST00000493037 ERICH3Q5RHP9 1530 aa32.34■■■□□ 2.77
RUNDC3B-207ENST00000493037 CFTRP13569 1480 aa32.32■■■□□ 2.76
RUNDC3B-207ENST00000493037 CUX1P39880 1505 aa32.32■■■□□ 2.76
RUNDC3B-207ENST00000493037 PRDM2Q13029 1718 aa32.26■■■□□ 2.75
RUNDC3B-207ENST00000493037 PRXQ9BXM0 1461 aa32.26■■■□□ 2.75
RUNDC3B-207ENST00000493037 APLP2Q06481 763 aa32.17■■■□□ 2.74
RUNDC3B-207ENST00000493037 KIF27Q86VH2 1401 aa32.16■■■□□ 2.74
RUNDC3B-207ENST00000493037 RANGAP1P46060 587 aaPredicted RBP32.04■■■□□ 2.72
RUNDC3B-207ENST00000493037 ARAP1Q96P48 1450 aa32.01■■■□□ 2.72
RUNDC3B-207ENST00000493037 HNRNPUL2Q1KMD3 747 aaKnown RBP31.96■■■□□ 2.71
RUNDC3B-207ENST00000493037 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.7
RUNDC3B-207ENST00000493037 DIEXFQ68CQ4 756 aaKnown RBP31.86■■■□□ 2.69
RUNDC3B-207ENST00000493037 CC2D2AQ9P2K1 1620 aa31.86■■■□□ 2.69
RUNDC3B-207ENST00000493037 CUX2O14529 1486 aa31.82■■■□□ 2.68
RUNDC3B-207ENST00000493037 FGD5Q6ZNL6 1462 aa31.76■■■□□ 2.67
RUNDC3B-207ENST00000493037 ARHGAP35Q9NRY4 1499 aa31.76■■■□□ 2.67
RUNDC3B-207ENST00000493037 IGF1RP08069 1367 aa31.75■■■□□ 2.67
RUNDC3B-207ENST00000493037 ZNF316A6NFI3 1004 aaPredicted RBP31.73■■■□□ 2.67
RUNDC3B-207ENST00000493037 KANK4Q5T7N3 995 aaPredicted RBP31.67■■■□□ 2.66
RUNDC3B-207ENST00000493037 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
RUNDC3B-207ENST00000493037 RRBP1Q9P2E9 1410 aaKnown RBP31.63■■■□□ 2.65
RUNDC3B-207ENST00000493037 CARMIL1Q5VZK9 1371 aa31.63■■■□□ 2.65
RUNDC3B-207ENST00000493037 SCAF1Q9H7N4 1312 aaKnown RBP31.63■■■□□ 2.65
RUNDC3B-207ENST00000493037 DNMBPQ6XZF7 1577 aa31.57■■■□□ 2.64
RUNDC3B-207ENST00000493037 CLSPNQ9HAW4 1339 aa31.55■■■□□ 2.64
RUNDC3B-207ENST00000493037 MAP3K1Q13233 1512 aa31.52■■■□□ 2.64
RUNDC3B-207ENST00000493037 ACIN1Q9UKV3 1341 aaKnown RBP31.5■■■□□ 2.63
RUNDC3B-207ENST00000493037 TIAM1Q13009 1591 aa31.46■■■□□ 2.63
RUNDC3B-207ENST00000493037 DHX57Q6P158 1386 aaKnown RBP31.46■■■□□ 2.63
RUNDC3B-207ENST00000493037 CCNB3Q8WWL7 1395 aa31.45■■■□□ 2.63
RUNDC3B-207ENST00000493037 ABCA10Q8WWZ4 1543 aa31.45■■■□□ 2.62
RUNDC3B-207ENST00000493037 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
RUNDC3B-207ENST00000493037 CENPBP07199 599 aaPredicted RBP31.43■■■□□ 2.62
RUNDC3B-207ENST00000493037 POLA1P09884 1462 aaPredicted RBP31.4■■■□□ 2.62
RUNDC3B-207ENST00000493037 NEUROD1Q13562 356 aa31.37■■■□□ 2.61
RUNDC3B-207ENST00000493037 RAD54L2Q9Y4B4 1467 aa31.37■■■□□ 2.61
RUNDC3B-207ENST00000493037 FHAD1B1AJZ9 1412 aa31.36■■■□□ 2.61
RUNDC3B-207ENST00000493037 NESP48681 1621 aa31.36■■■□□ 2.61
RUNDC3B-207ENST00000493037 CUL7Q14999 1698 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms