Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC136469.2-201ENST00000623944 1028 ntBASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC133637.1-201ENST00000624115 1537 ntBASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV23-1A0A0A0MS06 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC135279.3-201ENST00000610945 1311 ntBASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 AL136162.1-201ENST00000607711 1078 ntBASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV23-1A0A0A0MS06 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV23-1A0A0A0MS06 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 AL139246.5-201ENST00000606645 996 ntBASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.3■□□□□ 0.52
TRBV23-1A0A0A0MS06 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC092667.1-201ENST00000434301 2586 ntBASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRBV23-1A0A0A0MS06 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC024257.2-201ENST00000549699 147 ntBASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC106739.1-201ENST00000617035 715 ntBASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC110285.6-201ENST00000617652 491 ntBASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV23-1A0A0A0MS06 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV23-1A0A0A0MS06 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms