RNA–Protein interactions for RNA: ENST00000495414.5

C3orf58-207, Transcript of chromosome 3 open reading frame 58, humanhuman

TSL 2 BASIC

Gene C3orf58, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf58-207ENST00000495414 NISCHQ9Y2I1 1504 aa50.35■■■■■ 5.65
C3orf58-207ENST00000495414 CCDC180Q9P1Z9 1646 aa43.77■■■■■ 4.6
C3orf58-207ENST00000495414 ZCCHC6Q5VYS8 1495 aaKnown RBP42.32■■■■■ 4.37
C3orf58-207ENST00000495414 DCAF1Q9Y4B6 1507 aa41.62■■■■■ 4.25
C3orf58-207ENST00000495414 DCAF8L2P0C7V8 631 aa41.59■■■■■ 4.25
C3orf58-207ENST00000495414 ABCC9O60706 1549 aa41.39■■■■■ 4.22
C3orf58-207ENST00000495414 SHROOM4Q9ULL8 1493 aa41.19■■■■■ 4.18
C3orf58-207ENST00000495414 MYO15BQ96JP2 1530 aa41.09■■■■■ 4.17
C3orf58-207ENST00000495414 NACADO15069 1562 aa40.79■■■■■ 4.12
C3orf58-207ENST00000495414 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
C3orf58-207ENST00000495414 SCRIBQ14160 1630 aa40.32■■■■■ 4.05
C3orf58-207ENST00000495414 SUPT5HO00267 1087 aaKnown RBP39.69■■■■□ 3.94
C3orf58-207ENST00000495414 UNC13AQ9UPW8 1703 aa39.54■■■■□ 3.92
C3orf58-207ENST00000495414 BICRAQ9NZM4 1560 aa39.23■■■■□ 3.87
C3orf58-207ENST00000495414 CECR2Q9BXF3 1484 aa39.16■■■■□ 3.86
C3orf58-207ENST00000495414 RSF1Q96T23 1441 aaPredicted RBP39.14■■■■□ 3.86
C3orf58-207ENST00000495414 PABPN1Q86U42 306 aaKnown RBP eCLIP39.11■■■■□ 3.85
C3orf58-207ENST00000495414 MROH2BQ7Z745 1585 aa38.92■■■■□ 3.82
C3orf58-207ENST00000495414 BAZ1AQ9NRL2 1556 aaPredicted RBP38.84■■■■□ 3.81
C3orf58-207ENST00000495414 SMARCA4P51532 1647 aa38.65■■■■□ 3.78
C3orf58-207ENST00000495414 WIZO95785 1651 aa38.57■■■■□ 3.76
C3orf58-207ENST00000495414 PEG3Q9GZU2 1588 aa38.19■■■■□ 3.7
C3orf58-207ENST00000495414 TOP2AP11388 1531 aaKnown RBP38.18■■■■□ 3.7
C3orf58-207ENST00000495414 CHIC1Q5VXU3 224 aa38.07■■■■□ 3.69
C3orf58-207ENST00000495414 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
C3orf58-207ENST00000495414 EIF4G1Q04637 1599 aaKnown RBP38.02■■■■□ 3.68
C3orf58-207ENST00000495414 SMARCA2P51531 1590 aa37.97■■■■□ 3.67
C3orf58-207ENST00000495414 CCDC88BA6NC98 1476 aa37.83■■■■□ 3.65
C3orf58-207ENST00000495414 BAZ1BQ9UIG0 1483 aaKnown RBP37.8■■■■□ 3.64
C3orf58-207ENST00000495414 NCAPD3P42695 1498 aa37.7■■■■□ 3.63
C3orf58-207ENST00000495414 HMGXB3Q12766 1538 aa37.61■■■■□ 3.61
C3orf58-207ENST00000495414 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
C3orf58-207ENST00000495414 TRIM41Q8WV44 630 aa37.3■■■■□ 3.56
C3orf58-207ENST00000495414 ABCC8Q09428 1581 aa37.04■■■■□ 3.52
C3orf58-207ENST00000495414 CFTRP13569 1480 aa36.89■■■■□ 3.5
C3orf58-207ENST00000495414 WRNQ14191 1432 aaPredicted RBP eCLIP36.82■■■■□ 3.48
C3orf58-207ENST00000495414 CADPSQ9ULU8 1353 aa36.75■■■■□ 3.47
C3orf58-207ENST00000495414 SYNJ1O43426 1573 aa36.63■■■■□ 3.46
C3orf58-207ENST00000495414 LOC105371045A0A1W2PR82 267 aa36.63■■■■□ 3.45
C3orf58-207ENST00000495414 FAM9AQ8IZU1 332 aaPredicted RBP36.63■■■■□ 3.45
C3orf58-207ENST00000495414 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
C3orf58-207ENST00000495414 PRDM2Q13029 1718 aa36.55■■■■□ 3.44
C3orf58-207ENST00000495414 TOP2BQ02880 1626 aa36.47■■■■□ 3.43
C3orf58-207ENST00000495414 SOGA1O94964 1423 aa36.42■■■■□ 3.42
C3orf58-207ENST00000495414 BIVM-ERCC5R4GMW8 1640 aa36.4■■■■□ 3.42
C3orf58-207ENST00000495414 NESP48681 1621 aa36.38■■■■□ 3.41
C3orf58-207ENST00000495414 CUX1P39880 1505 aa36.37■■■■□ 3.41
C3orf58-207ENST00000495414 LAMC3Q9Y6N6 1575 aa36.34■■■■□ 3.41
C3orf58-207ENST00000495414 FANCD2Q9BXW9 1451 aa36.33■■■■□ 3.41
C3orf58-207ENST00000495414 EEA1Q15075 1411 aa36.32■■■■□ 3.41
C3orf58-207ENST00000495414 RUSC2Q8N2Y8 1516 aa36.27■■■■□ 3.4
C3orf58-207ENST00000495414 CSRNP3Q8WYN3 585 aa36.17■■■■□ 3.38
C3orf58-207ENST00000495414 EHMT2Q96KQ7 1210 aa36.11■■■■□ 3.37
C3orf58-207ENST00000495414 PDS5BQ9NTI5 1447 aa36.09■■■■□ 3.37
C3orf58-207ENST00000495414 CEP164Q9UPV0 1460 aa36.06■■■■□ 3.36
C3orf58-207ENST00000495414 DNMBPQ6XZF7 1577 aa35.98■■■■□ 3.35
C3orf58-207ENST00000495414 FGD5Q6ZNL6 1462 aa35.96■■■■□ 3.35
C3orf58-207ENST00000495414 TOPBP1Q92547 1522 aa35.94■■■■□ 3.34
C3orf58-207ENST00000495414 URB2Q14146 1524 aaKnown RBP35.87■■■■□ 3.33
C3orf58-207ENST00000495414 KIF27Q86VH2 1401 aa35.87■■■■□ 3.33
C3orf58-207ENST00000495414 KIF21AQ7Z4S6 1674 aa35.86■■■■□ 3.33
C3orf58-207ENST00000495414 GOLGA3Q08378 1498 aa35.83■■■■□ 3.33
C3orf58-207ENST00000495414 KIF21BO75037 1637 aa35.82■■■■□ 3.32
C3orf58-207ENST00000495414 POLA1P09884 1462 aaPredicted RBP35.78■■■■□ 3.32
C3orf58-207ENST00000495414 TNIKQ9UKE5 1360 aa35.77■■■■□ 3.32
C3orf58-207ENST00000495414 CUX2O14529 1486 aa35.76■■■■□ 3.31
C3orf58-207ENST00000495414 UBTFP17480 764 aaKnown RBP35.7■■■■□ 3.31
C3orf58-207ENST00000495414 RAD54L2Q9Y4B4 1467 aa35.69■■■■□ 3.3
C3orf58-207ENST00000495414 PRXQ9BXM0 1461 aa35.67■■■■□ 3.3
C3orf58-207ENST00000495414 RAPGEF2Q9Y4G8 1499 aa35.66■■■■□ 3.3
C3orf58-207ENST00000495414 ABCA10Q8WWZ4 1543 aa35.65■■■■□ 3.3
C3orf58-207ENST00000495414 MRC2Q9UBG0 1479 aa35.62■■■■□ 3.29
C3orf58-207ENST00000495414 IGF1RP08069 1367 aa35.59■■■■□ 3.29
C3orf58-207ENST00000495414 ERICH3Q5RHP9 1530 aa35.57■■■■□ 3.29
C3orf58-207ENST00000495414 CEP162Q5TB80 1403 aa35.57■■■■□ 3.28
C3orf58-207ENST00000495414 WDR97A6NE52 1622 aa35.45■■■■□ 3.27
C3orf58-207ENST00000495414 ERCC6Q03468 1493 aa35.45■■■■□ 3.27
C3orf58-207ENST00000495414 WDR62O43379 1518 aa35.42■■■■□ 3.26
C3orf58-207ENST00000495414 CARMIL1Q5VZK9 1371 aa35.39■■■■□ 3.26
C3orf58-207ENST00000495414 TARBP1Q13395 1621 aaKnown RBP35.37■■■■□ 3.25
C3orf58-207ENST00000495414 TDRD9Q8NDG6 1382 aaKnown RBP35.34■■■■□ 3.25
C3orf58-207ENST00000495414 ABCA5Q8WWZ7 1642 aa35.31■■■■□ 3.24
C3orf58-207ENST00000495414 CLIP1P30622 1438 aa35.28■■■■□ 3.24
C3orf58-207ENST00000495414 THOC2Q8NI27 1593 aaKnown RBP35.27■■■■□ 3.24
C3orf58-207ENST00000495414 GAPVD1Q14C86 1478 aa35.27■■■■□ 3.24
C3orf58-207ENST00000495414 IFT140Q96RY7 1462 aa35.21■■■■□ 3.23
C3orf58-207ENST00000495414 CUL7Q14999 1698 aa35.19■■■■□ 3.22
C3orf58-207ENST00000495414 AQRO60306 1485 aaKnown RBP eCLIP35.09■■■■□ 3.21
C3orf58-207ENST00000495414 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
C3orf58-207ENST00000495414 ZNF608Q9ULD9 1512 aaPredicted RBP35.04■■■■□ 3.2
C3orf58-207ENST00000495414 PCGF6Q9BYE7 350 aa35.03■■■■□ 3.2
C3orf58-207ENST00000495414 TRIM26Q12899 539 aaPredicted RBP34.99■■■■□ 3.19
C3orf58-207ENST00000495414 GRIN2BQ13224 1484 aa34.98■■■■□ 3.19
C3orf58-207ENST00000495414 VPS8Q8N3P4 1428 aa34.98■■■■□ 3.19
C3orf58-207ENST00000495414 PBRM1Q86U86 1689 aa34.98■■■■□ 3.19
C3orf58-207ENST00000495414 ARAP1Q96P48 1450 aa34.92■■■■□ 3.18
C3orf58-207ENST00000495414 FHAD1B1AJZ9 1412 aa34.9■■■■□ 3.18
C3orf58-207ENST00000495414 ARHGAP35Q9NRY4 1499 aa34.9■■■■□ 3.18
C3orf58-207ENST00000495414 PPARGC1BQ86YN6 1023 aaKnown RBP34.89■■■■□ 3.18
C3orf58-207ENST00000495414 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms