Protein–RNA interactions for Protein: Q9BZR6

RTN4R, Reticulon-4 receptor, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RQ9BZR6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RQ9BZR6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RTN4RQ9BZR6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTN4RQ9BZR6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTN4RQ9BZR6 AC233723.2-201ENST00000623798 2106 ntBASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 MIR939-201ENST00000401314 82 ntBASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 AC233992.3-201ENST00000607491 485 ntBASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 AC012676.1-201ENST00000574705 1949 ntBASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTN4RQ9BZR6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 AC099791.1-201ENST00000416440 715 ntBASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTN4RQ9BZR6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTN4RQ9BZR6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTN4RQ9BZR6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4RQ9BZR6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4RQ9BZR6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4RQ9BZR6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4RQ9BZR6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN4RQ9BZR6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.02■□□□□ 0.79
RTN4RQ9BZR6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 AC080038.3-201ENST00000623346 1952 ntBASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN4RQ9BZR6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4RQ9BZR6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20■□□□□ 0.79
RTN4RQ9BZR6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4RQ9BZR6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20■□□□□ 0.79
RTN4RQ9BZR6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20■□□□□ 0.79
RTN4RQ9BZR6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20■□□□□ 0.79
RTN4RQ9BZR6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN4RQ9BZR6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20■□□□□ 0.79
RTN4RQ9BZR6 AC027682.1-201ENST00000562846 899 ntBASIC20■□□□□ 0.79
RTN4RQ9BZR6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN4RQ9BZR6 AC137767.1-201ENST00000602918 1920 ntBASIC20■□□□□ 0.79
RTN4RQ9BZR6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4RQ9BZR6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RTN4RQ9BZR6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4RQ9BZR6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTN4RQ9BZR6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4RQ9BZR6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN4RQ9BZR6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms