Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SDF2Q99470 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
SDF2Q99470 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SDF2Q99470 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.28■□□□□ 0.84
SDF2Q99470 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.28■□□□□ 0.84
SDF2Q99470 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.28■□□□□ 0.84
SDF2Q99470 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SDF2Q99470 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.28■□□□□ 0.84
SDF2Q99470 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SDF2Q99470 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SDF2Q99470 AC137767.1-201ENST00000602918 1920 ntBASIC20.27■□□□□ 0.84
SDF2Q99470 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SDF2Q99470 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SDF2Q99470 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.27■□□□□ 0.84
SDF2Q99470 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.27■□□□□ 0.84
SDF2Q99470 CA15P2-201ENST00000611168 834 ntBASIC20.27■□□□□ 0.84
SDF2Q99470 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.27■□□□□ 0.84
SDF2Q99470 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
SDF2Q99470 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SDF2Q99470 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SDF2Q99470 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SDF2Q99470 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
SDF2Q99470 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
SDF2Q99470 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.26■□□□□ 0.83
SDF2Q99470 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
SDF2Q99470 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 AC092053.2-201ENST00000640557 1818 ntBASIC20.26■□□□□ 0.83
SDF2Q99470 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.26■□□□□ 0.83
SDF2Q99470 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SDF2Q99470 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.26■□□□□ 0.83
SDF2Q99470 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.26■□□□□ 0.83
SDF2Q99470 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SDF2Q99470 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SDF2Q99470 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SDF2Q99470 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SDF2Q99470 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SDF2Q99470 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SDF2Q99470 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SDF2Q99470 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
SDF2Q99470 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.24■□□□□ 0.83
SDF2Q99470 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.24■□□□□ 0.83
SDF2Q99470 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SDF2Q99470 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SDF2Q99470 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDF2Q99470 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
SDF2Q99470 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SDF2Q99470 DUX4L19-201ENST00000557448 1267 ntBASIC20.24■□□□□ 0.83
SDF2Q99470 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SDF2Q99470 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.24■□□□□ 0.83
SDF2Q99470 AL031602.1-201ENST00000633169 911 ntBASIC20.24■□□□□ 0.83
SDF2Q99470 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDF2Q99470 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SDF2Q99470 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SDF2Q99470 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.23■□□□□ 0.83
SDF2Q99470 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.23■□□□□ 0.83
SDF2Q99470 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.23■□□□□ 0.83
SDF2Q99470 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.23■□□□□ 0.83
SDF2Q99470 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.23■□□□□ 0.83
SDF2Q99470 SYT6-210ENST00000641643 1587 ntBASIC20.23■□□□□ 0.83
SDF2Q99470 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.23■□□□□ 0.83
SDF2Q99470 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SDF2Q99470 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.22■□□□□ 0.83
SDF2Q99470 LINC00565-201ENST00000562710 2331 ntBASIC20.22■□□□□ 0.83
SDF2Q99470 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SDF2Q99470 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms