Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
UPF3BQ9BZI7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
UPF3BQ9BZI7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
UPF3BQ9BZI7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 DUX4L4-201ENST00000566884 1269 ntBASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 C17orf82-201ENST00000623772 1530 ntBASIC26.29■■□□□ 1.8
UPF3BQ9BZI7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 AC139530.1-201ENST00000575312 1977 ntBASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.28■■□□□ 1.8
UPF3BQ9BZI7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
UPF3BQ9BZI7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
UPF3BQ9BZI7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
UPF3BQ9BZI7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 CLDN5-201ENST00000403084 2357 ntBASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 MIR6724-1-201ENST00000616420 92 ntBASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 MIR6724-2-201ENST00000616483 92 ntBASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 MIR6724-4-201ENST00000617390 92 ntBASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 MIR6724-3-201ENST00000622482 92 ntBASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
UPF3BQ9BZI7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 AC004687.1-201ENST00000579003 1625 ntBASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
UPF3BQ9BZI7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms