Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.85■■□□□ 1.09
MTHFD1P11586 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.85■■□□□ 1.09
MTHFD1P11586 AC106739.1-201ENST00000617035 715 ntBASIC21.85■■□□□ 1.09
MTHFD1P11586 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD1P11586 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
MTHFD1P11586 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MTHFD1P11586 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.85■■□□□ 1.09
MTHFD1P11586 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD1P11586 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MTHFD1P11586 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 AC024257.2-201ENST00000549699 147 ntBASIC21.84■■□□□ 1.09
MTHFD1P11586 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.84■■□□□ 1.09
MTHFD1P11586 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MTHFD1P11586 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.83■■□□□ 1.09
MTHFD1P11586 AL138724.1-201ENST00000606771 1088 ntBASIC21.83■■□□□ 1.09
MTHFD1P11586 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.83■■□□□ 1.09
MTHFD1P11586 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MTHFD1P11586 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.83■■□□□ 1.08
MTHFD1P11586 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
MTHFD1P11586 AC144652.1-201ENST00000609974 1624 ntBASIC21.83■■□□□ 1.08
MTHFD1P11586 FP325331.1-202ENST00000623531 1380 ntBASIC21.83■■□□□ 1.08
MTHFD1P11586 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.83■■□□□ 1.08
MTHFD1P11586 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD1P11586 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD1P11586 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD1P11586 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.82■■□□□ 1.08
MTHFD1P11586 AC133561.4-201ENST00000566112 224 ntBASIC21.82■■□□□ 1.08
MTHFD1P11586 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.82■■□□□ 1.08
MTHFD1P11586 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.82■■□□□ 1.08
MTHFD1P11586 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD1P11586 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MTHFD1P11586 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFD1P11586 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
MTHFD1P11586 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFD1P11586 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFD1P11586 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFD1P11586 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.81■■□□□ 1.08
MTHFD1P11586 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.81■■□□□ 1.08
MTHFD1P11586 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFD1P11586 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.8■■□□□ 1.08
MTHFD1P11586 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.8■■□□□ 1.08
MTHFD1P11586 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
MTHFD1P11586 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.8■■□□□ 1.08
MTHFD1P11586 MIR3181-201ENST00000578512 73 ntBASIC21.8■■□□□ 1.08
MTHFD1P11586 AC011298.3-201ENST00000615796 283 ntBASIC21.8■■□□□ 1.08
MTHFD1P11586 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.8■■□□□ 1.08
MTHFD1P11586 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
MTHFD1P11586 AL117328.2-201ENST00000624617 1940 ntBASIC21.8■■□□□ 1.08
MTHFD1P11586 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFD1P11586 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
MTHFD1P11586 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
MTHFD1P11586 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MTHFD1P11586 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
MTHFD1P11586 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.79■■□□□ 1.08
MTHFD1P11586 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFD1P11586 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
MTHFD1P11586 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.78■■□□□ 1.08
MTHFD1P11586 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.78■■□□□ 1.08
MTHFD1P11586 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFD1P11586 DUX4L4-201ENST00000566884 1269 ntBASIC21.78■■□□□ 1.08
MTHFD1P11586 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.78■■□□□ 1.08
MTHFD1P11586 pRNA.6-201ENST00000610482 90 ntBASIC21.78■■□□□ 1.08
MTHFD1P11586 pRNA.5-201ENST00000612139 90 ntBASIC21.78■■□□□ 1.08
MTHFD1P11586 pRNA.11-201ENST00000618423 90 ntBASIC21.78■■□□□ 1.08
MTHFD1P11586 pRNA.13-201ENST00000619112 90 ntBASIC21.78■■□□□ 1.08
MTHFD1P11586 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFD1P11586 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFD1P11586 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
MTHFD1P11586 AC079630.1-202ENST00000618127 1840 ntBASIC21.78■■□□□ 1.08
MTHFD1P11586 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFD1P11586 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
MTHFD1P11586 LINC01529-204ENST00000636474 1715 ntBASIC21.77■■□□□ 1.08
MTHFD1P11586 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
MTHFD1P11586 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.77■■□□□ 1.08
MTHFD1P11586 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms