Protein–RNA interactions for Protein: J3KQ70

INO80B-WBP1, HCG2039827, isoform CRA_e, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80B-WBP1J3KQ70 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.3■■□□□ 1.48
INO80B-WBP1J3KQ70 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
INO80B-WBP1J3KQ70 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.28■■□□□ 1.48
INO80B-WBP1J3KQ70 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 AC092068.2-201ENST00000590491 1708 ntBASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 IGHV3-19-201ENST00000521488 291 ntBASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 RARRES2P6-201ENST00000567333 442 ntBASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
INO80B-WBP1J3KQ70 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
INO80B-WBP1J3KQ70 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
INO80B-WBP1J3KQ70 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
INO80B-WBP1J3KQ70 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
INO80B-WBP1J3KQ70 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
INO80B-WBP1J3KQ70 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms