Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01006Q8NI28 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01006Q8NI28 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01006Q8NI28 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.46■□□□□ 0.39
LINC01006Q8NI28 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 AC105233.4-201ENST00000642045 216 ntBASIC17.46■□□□□ 0.39
LINC01006Q8NI28 AC138932.3-201ENST00000567634 1902 ntBASIC17.46■□□□□ 0.39
LINC01006Q8NI28 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01006Q8NI28 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.46■□□□□ 0.38
LINC01006Q8NI28 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.46■□□□□ 0.38
LINC01006Q8NI28 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LINC01006Q8NI28 AC142381.3-201ENST00000568208 1670 ntBASIC17.45■□□□□ 0.38
LINC01006Q8NI28 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01006Q8NI28 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.44■□□□□ 0.38
LINC01006Q8NI28 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.44■□□□□ 0.38
LINC01006Q8NI28 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.43■□□□□ 0.38
LINC01006Q8NI28 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.42■□□□□ 0.38
LINC01006Q8NI28 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LINC01006Q8NI28 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.4■□□□□ 0.38
LINC01006Q8NI28 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms