Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 AL592293.1-201ENST00000502889 1188 ntBASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC71LQ8N9Z2 C11orf96-202ENST00000528572 1834 ntBASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 SPCS2P3-201ENST00000500401 656 ntBASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC71LQ8N9Z2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 AC007375.3-201ENST00000600936 2314 ntBASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 LONRF2P2-201ENST00000439212 571 ntBASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC71LQ8N9Z2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC71LQ8N9Z2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC71LQ8N9Z2 AC139530.1-201ENST00000575312 1977 ntBASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC71LQ8N9Z2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC71LQ8N9Z2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CCDC71LQ8N9Z2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms