Protein–RNA interactions for Protein: Q8TA86

RP9, Retinitis pigmentosa 9 protein, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP9Q8TA86 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP9Q8TA86 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RP9Q8TA86 AC011551.1-201ENST00000614101 683 ntBASIC21.48■■□□□ 1.03
RP9Q8TA86 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP9Q8TA86 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.48■■□□□ 1.03
RP9Q8TA86 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.48■■□□□ 1.03
RP9Q8TA86 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RP9Q8TA86 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 PKD1P6-201ENST00000343738 4769 ntBASIC21.47■■□□□ 1.03
RP9Q8TA86 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RP9Q8TA86 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.47■■□□□ 1.03
RP9Q8TA86 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RP9Q8TA86 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.47■■□□□ 1.03
RP9Q8TA86 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.47■■□□□ 1.03
RP9Q8TA86 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.46■■□□□ 1.03
RP9Q8TA86 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.46■■□□□ 1.03
RP9Q8TA86 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RP9Q8TA86 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.46■■□□□ 1.03
RP9Q8TA86 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RP9Q8TA86 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RP9Q8TA86 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RP9Q8TA86 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RP9Q8TA86 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RP9Q8TA86 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RP9Q8TA86 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RP9Q8TA86 AL353803.4-201ENST00000565882 1934 ntBASIC21.45■■□□□ 1.02
RP9Q8TA86 AC080038.3-201ENST00000623346 1952 ntBASIC21.45■■□□□ 1.02
RP9Q8TA86 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RP9Q8TA86 FBXW4P1-201ENST00000426721 2239 ntBASIC21.45■■□□□ 1.02
RP9Q8TA86 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
RP9Q8TA86 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RP9Q8TA86 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RP9Q8TA86 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RP9Q8TA86 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.44■■□□□ 1.02
RP9Q8TA86 GPX1-201ENST00000419349 1106 ntBASIC21.44■■□□□ 1.02
RP9Q8TA86 SPCS2P3-201ENST00000500401 656 ntBASIC21.44■■□□□ 1.02
RP9Q8TA86 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.44■■□□□ 1.02
RP9Q8TA86 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RP9Q8TA86 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.44■■□□□ 1.02
RP9Q8TA86 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.44■■□□□ 1.02
RP9Q8TA86 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RP9Q8TA86 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RP9Q8TA86 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RP9Q8TA86 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RP9Q8TA86 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RP9Q8TA86 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.43■■□□□ 1.02
RP9Q8TA86 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
RP9Q8TA86 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.43■■□□□ 1.02
RP9Q8TA86 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP9Q8TA86 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.42■■□□□ 1.02
RP9Q8TA86 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP9Q8TA86 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP9Q8TA86 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RP9Q8TA86 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP9Q8TA86 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP9Q8TA86 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RP9Q8TA86 LONRF2P2-201ENST00000439212 571 ntBASIC21.42■■□□□ 1.02
RP9Q8TA86 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RP9Q8TA86 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RP9Q8TA86 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.42■■□□□ 1.02
RP9Q8TA86 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
RP9Q8TA86 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RP9Q8TA86 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RP9Q8TA86 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
RP9Q8TA86 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RP9Q8TA86 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RP9Q8TA86 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.41■■□□□ 1.02
RP9Q8TA86 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.4■■□□□ 1.02
RP9Q8TA86 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RP9Q8TA86 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RP9Q8TA86 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.4■■□□□ 1.02
RP9Q8TA86 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.4■■□□□ 1.02
RP9Q8TA86 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.39■■□□□ 1.02
RP9Q8TA86 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.39■■□□□ 1.02
RP9Q8TA86 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RP9Q8TA86 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RP9Q8TA86 AL592293.1-201ENST00000502889 1188 ntBASIC21.39■■□□□ 1.01
RP9Q8TA86 MIR6765-201ENST00000614092 87 ntBASIC21.39■■□□□ 1.01
RP9Q8TA86 MIR7108-201ENST00000614319 87 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms