Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 AL358852.1-201ENST00000623174 1268 ntBASIC23.23■■□□□ 1.31
BRD9Q9H8M2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.23■■□□□ 1.31
BRD9Q9H8M2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD9Q9H8M2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
BRD9Q9H8M2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD9Q9H8M2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD9Q9H8M2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.21■■□□□ 1.31
BRD9Q9H8M2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.21■■□□□ 1.31
BRD9Q9H8M2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD9Q9H8M2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 IGHV3-19-201ENST00000521488 291 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L2-201ENST00000561772 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L6-201ENST00000626483 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L1-201ENST00000627662 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L8-201ENST00000629013 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L3-201ENST00000630187 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L7-201ENST00000630678 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 DUX4L5-201ENST00000630834 1275 ntBASIC23.2■■□□□ 1.3
BRD9Q9H8M2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD9Q9H8M2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 AC027612.3-201ENST00000413684 1047 ntBASIC23.19■■□□□ 1.3
BRD9Q9H8M2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BRD9Q9H8M2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 MIR572-201ENST00000384983 95 ntBASIC23.18■■□□□ 1.3
BRD9Q9H8M2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 AC123595.1-201ENST00000440769 1046 ntBASIC23.18■■□□□ 1.3
BRD9Q9H8M2 MIR6084-201ENST00000622012 110 ntBASIC23.18■■□□□ 1.3
BRD9Q9H8M2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
BRD9Q9H8M2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
BRD9Q9H8M2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.16■■□□□ 1.3
BRD9Q9H8M2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
BRD9Q9H8M2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BRD9Q9H8M2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
BRD9Q9H8M2 AC012414.1-201ENST00000556676 535 ntBASIC23.16■■□□□ 1.3
BRD9Q9H8M2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BRD9Q9H8M2 AC135731.1-201ENST00000569415 2548 ntBASIC23.15■■□□□ 1.3
BRD9Q9H8M2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 AC133637.1-201ENST00000624115 1537 ntBASIC23.15■■□□□ 1.3
BRD9Q9H8M2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 AL354811.1-201ENST00000610286 706 ntBASIC23.15■■□□□ 1.3
BRD9Q9H8M2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.15■■□□□ 1.3
BRD9Q9H8M2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms