Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
LINC01555Q8NAE3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
LINC01555Q8NAE3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
LINC01555Q8NAE3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 AC009086.3-201ENST00000623486 1008 ntBASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC01555Q8NAE3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 AC096631.2-201ENST00000436136 790 ntBASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 LINC01529-204ENST00000636474 1715 ntBASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.63■■□□□ 1.05
LINC01555Q8NAE3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 DUX4L4-201ENST00000566884 1269 ntBASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 AC092171.4-201ENST00000609130 632 ntBASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 AL353803.4-201ENST00000565882 1934 ntBASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
LINC01555Q8NAE3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 AC110285.6-201ENST00000617652 491 ntBASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LINC01555Q8NAE3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 UNC93B3-201ENST00000308076 687 ntBASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LINC01555Q8NAE3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 SYT6-210ENST00000641643 1587 ntBASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.59■■□□□ 1.05
LINC01555Q8NAE3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 DUX4L19-201ENST00000557448 1267 ntBASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 MIR3181-201ENST00000578512 73 ntBASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
LINC01555Q8NAE3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.58■■□□□ 1.04
LINC01555Q8NAE3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms