RNA–Protein interactions for RNA: ENST00000265729.6

SRI-201, Transcript of sorcin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRI, Length 2,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRI-201ENST00000265729 NISCHQ9Y2I1 1504 aa50.4■■■■■ 5.66
SRI-201ENST00000265729 CCDC180Q9P1Z9 1646 aa43.74■■■■■ 4.59
SRI-201ENST00000265729 ZCCHC6Q5VYS8 1495 aaKnown RBP42.33■■■■■ 4.37
SRI-201ENST00000265729 DCAF8L2P0C7V8 631 aa41.83■■■■■ 4.29
SRI-201ENST00000265729 DCAF1Q9Y4B6 1507 aa41.58■■■■■ 4.25
SRI-201ENST00000265729 ABCC9O60706 1549 aa41.47■■■■■ 4.23
SRI-201ENST00000265729 SHROOM4Q9ULL8 1493 aa41.39■■■■■ 4.22
SRI-201ENST00000265729 MYO15BQ96JP2 1530 aa41.02■■■■■ 4.16
SRI-201ENST00000265729 NACADO15069 1562 aa40.78■■■■■ 4.12
SRI-201ENST00000265729 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
SRI-201ENST00000265729 SCRIBQ14160 1630 aa40.4■■■■■ 4.06
SRI-201ENST00000265729 SUPT5HO00267 1087 aaKnown RBP39.92■■■■□ 3.98
SRI-201ENST00000265729 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
SRI-201ENST00000265729 PABPN1Q86U42 306 aaKnown RBP eCLIP39.24■■■■□ 3.87
SRI-201ENST00000265729 BICRAQ9NZM4 1560 aa39.23■■■■□ 3.87
SRI-201ENST00000265729 CECR2Q9BXF3 1484 aa39.23■■■■□ 3.87
SRI-201ENST00000265729 RSF1Q96T23 1441 aaPredicted RBP39.2■■■■□ 3.87
SRI-201ENST00000265729 MROH2BQ7Z745 1585 aa38.98■■■■□ 3.83
SRI-201ENST00000265729 BAZ1AQ9NRL2 1556 aaPredicted RBP38.87■■■■□ 3.81
SRI-201ENST00000265729 SMARCA4P51532 1647 aa38.68■■■■□ 3.78
SRI-201ENST00000265729 WIZO95785 1651 aa38.66■■■■□ 3.78
SRI-201ENST00000265729 CHIC1Q5VXU3 224 aa38.22■■■■□ 3.71
SRI-201ENST00000265729 TOP2AP11388 1531 aaKnown RBP38.19■■■■□ 3.7
SRI-201ENST00000265729 PEG3Q9GZU2 1588 aa38.17■■■■□ 3.7
SRI-201ENST00000265729 ATAD2BQ9ULI0 1458 aa38.07■■■■□ 3.68
SRI-201ENST00000265729 EIF4G1Q04637 1599 aaKnown RBP38.04■■■■□ 3.68
SRI-201ENST00000265729 SMARCA2P51531 1590 aa37.98■■■■□ 3.67
SRI-201ENST00000265729 CCDC88BA6NC98 1476 aa37.9■■■■□ 3.66
SRI-201ENST00000265729 BAZ1BQ9UIG0 1483 aaKnown RBP37.85■■■■□ 3.65
SRI-201ENST00000265729 NCAPD3P42695 1498 aa37.7■■■■□ 3.63
SRI-201ENST00000265729 HMGXB3Q12766 1538 aa37.58■■■■□ 3.61
SRI-201ENST00000265729 TRIM41Q8WV44 630 aa37.48■■■■□ 3.59
SRI-201ENST00000265729 CC2D2AQ9P2K1 1620 aa37.46■■■■□ 3.59
SRI-201ENST00000265729 ABCC8Q09428 1581 aa37.16■■■■□ 3.54
SRI-201ENST00000265729 CFTRP13569 1480 aa36.91■■■■□ 3.5
SRI-201ENST00000265729 WRNQ14191 1432 aaPredicted RBP eCLIP36.88■■■■□ 3.49
SRI-201ENST00000265729 FAM9AQ8IZU1 332 aaPredicted RBP36.86■■■■□ 3.49
SRI-201ENST00000265729 LOC105371045A0A1W2PR82 267 aa36.86■■■■□ 3.49
SRI-201ENST00000265729 CADPSQ9ULU8 1353 aa36.79■■■■□ 3.48
SRI-201ENST00000265729 SYNJ1O43426 1573 aa36.7■■■■□ 3.47
SRI-201ENST00000265729 DNAJC5BQ9UF47 199 aa36.68■■■■□ 3.46
SRI-201ENST00000265729 PRDM2Q13029 1718 aa36.56■■■■□ 3.44
SRI-201ENST00000265729 SOGA1O94964 1423 aa36.53■■■■□ 3.44
SRI-201ENST00000265729 TOP2BQ02880 1626 aa36.5■■■■□ 3.43
SRI-201ENST00000265729 NESP48681 1621 aa36.45■■■■□ 3.43
SRI-201ENST00000265729 CUX1P39880 1505 aa36.42■■■■□ 3.42
SRI-201ENST00000265729 BIVM-ERCC5R4GMW8 1640 aa36.42■■■■□ 3.42
SRI-201ENST00000265729 EHMT2Q96KQ7 1210 aa36.41■■■■□ 3.42
SRI-201ENST00000265729 RUSC2Q8N2Y8 1516 aa36.4■■■■□ 3.42
SRI-201ENST00000265729 FANCD2Q9BXW9 1451 aa36.36■■■■□ 3.41
SRI-201ENST00000265729 EEA1Q15075 1411 aa36.35■■■■□ 3.41
SRI-201ENST00000265729 LAMC3Q9Y6N6 1575 aa36.34■■■■□ 3.41
SRI-201ENST00000265729 CSRNP3Q8WYN3 585 aa36.29■■■■□ 3.4
SRI-201ENST00000265729 PDS5BQ9NTI5 1447 aa36.13■■■■□ 3.37
SRI-201ENST00000265729 CEP164Q9UPV0 1460 aa36.09■■■■□ 3.37
SRI-201ENST00000265729 FGD5Q6ZNL6 1462 aa36.01■■■■□ 3.35
SRI-201ENST00000265729 DNMBPQ6XZF7 1577 aa36■■■■□ 3.35
SRI-201ENST00000265729 TOPBP1Q92547 1522 aa35.97■■■■□ 3.35
SRI-201ENST00000265729 KIF27Q86VH2 1401 aa35.93■■■■□ 3.34
SRI-201ENST00000265729 KIF21AQ7Z4S6 1674 aa35.91■■■■□ 3.34
SRI-201ENST00000265729 URB2Q14146 1524 aaKnown RBP35.9■■■■□ 3.34
SRI-201ENST00000265729 GOLGA3Q08378 1498 aa35.89■■■■□ 3.34
SRI-201ENST00000265729 UBTFP17480 764 aaKnown RBP35.88■■■■□ 3.33
SRI-201ENST00000265729 KIF21BO75037 1637 aa35.85■■■■□ 3.33
SRI-201ENST00000265729 TNIKQ9UKE5 1360 aa35.84■■■■□ 3.33
SRI-201ENST00000265729 CUX2O14529 1486 aa35.82■■■■□ 3.33
SRI-201ENST00000265729 POLA1P09884 1462 aaPredicted RBP35.82■■■■□ 3.33
SRI-201ENST00000265729 RAD54L2Q9Y4B4 1467 aa35.76■■■■□ 3.31
SRI-201ENST00000265729 RAPGEF2Q9Y4G8 1499 aa35.75■■■■□ 3.31
SRI-201ENST00000265729 PRXQ9BXM0 1461 aa35.71■■■■□ 3.31
SRI-201ENST00000265729 CEP162Q5TB80 1403 aa35.68■■■■□ 3.3
SRI-201ENST00000265729 ABCA10Q8WWZ4 1543 aa35.66■■■■□ 3.3
SRI-201ENST00000265729 IGF1RP08069 1367 aa35.66■■■■□ 3.3
SRI-201ENST00000265729 MRC2Q9UBG0 1479 aa35.62■■■■□ 3.29
SRI-201ENST00000265729 ERICH3Q5RHP9 1530 aa35.6■■■■□ 3.29
SRI-201ENST00000265729 ERCC6Q03468 1493 aa35.51■■■■□ 3.28
SRI-201ENST00000265729 CARMIL1Q5VZK9 1371 aa35.46■■■■□ 3.27
SRI-201ENST00000265729 WDR97A6NE52 1622 aa35.45■■■■□ 3.27
SRI-201ENST00000265729 TDRD9Q8NDG6 1382 aaKnown RBP35.44■■■■□ 3.26
SRI-201ENST00000265729 WDR62O43379 1518 aa35.41■■■■□ 3.26
SRI-201ENST00000265729 TARBP1Q13395 1621 aaKnown RBP35.39■■■■□ 3.26
SRI-201ENST00000265729 CLIP1P30622 1438 aa35.37■■■■□ 3.25
SRI-201ENST00000265729 RANGAP1P46060 587 aaPredicted RBP35.34■■■■□ 3.25
SRI-201ENST00000265729 GAPVD1Q14C86 1478 aa35.32■■■■□ 3.25
SRI-201ENST00000265729 ABCA5Q8WWZ7 1642 aa35.32■■■■□ 3.24
SRI-201ENST00000265729 PCGF6Q9BYE7 350 aa35.29■■■■□ 3.24
SRI-201ENST00000265729 THOC2Q8NI27 1593 aaKnown RBP35.26■■■■□ 3.23
SRI-201ENST00000265729 IFT140Q96RY7 1462 aa35.21■■■■□ 3.23
SRI-201ENST00000265729 CUL7Q14999 1698 aa35.21■■■■□ 3.23
SRI-201ENST00000265729 TRIM26Q12899 539 aaPredicted RBP35.18■■■■□ 3.22
SRI-201ENST00000265729 AQRO60306 1485 aaKnown RBP eCLIP35.17■■■■□ 3.22
SRI-201ENST00000265729 PPARGC1BQ86YN6 1023 aaKnown RBP35.16■■■■□ 3.22
SRI-201ENST00000265729 ZNF608Q9ULD9 1512 aaPredicted RBP35.1■■■■□ 3.21
SRI-201ENST00000265729 VPS8Q8N3P4 1428 aa35.05■■■■□ 3.2
SRI-201ENST00000265729 PBRM1Q86U86 1689 aa35.01■■■■□ 3.2
SRI-201ENST00000265729 GRIN2BQ13224 1484 aa35■■■■□ 3.19
SRI-201ENST00000265729 ARAP1Q96P48 1450 aa34.98■■■■□ 3.19
SRI-201ENST00000265729 ARHGAP35Q9NRY4 1499 aa34.97■■■■□ 3.19
SRI-201ENST00000265729 FHAD1B1AJZ9 1412 aa34.92■■■■□ 3.18
SRI-201ENST00000265729 EIF4G3O43432 1585 aaKnown RBP34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms