Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 LINC00565-201ENST00000562710 2331 ntBASIC19.74■□□□□ 0.75
ODF4Q2M2E3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ODF4Q2M2E3 CLDN5-201ENST00000403084 2357 ntBASIC19.73■□□□□ 0.75
ODF4Q2M2E3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ODF4Q2M2E3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 GUSBP5-202ENST00000510805 1989 ntBASIC19.72■□□□□ 0.75
ODF4Q2M2E3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 AC004987.1-201ENST00000428627 508 ntBASIC19.72■□□□□ 0.75
ODF4Q2M2E3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.72■□□□□ 0.75
ODF4Q2M2E3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ODF4Q2M2E3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 AC079630.1-202ENST00000618127 1840 ntBASIC19.7■□□□□ 0.74
ODF4Q2M2E3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 ATP5G2P3-201ENST00000429083 425 ntBASIC19.7■□□□□ 0.74
ODF4Q2M2E3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 AC010980.1-201ENST00000587192 1142 ntBASIC19.7■□□□□ 0.74
ODF4Q2M2E3 THA1P-201ENST00000590384 1145 ntBASIC19.7■□□□□ 0.74
ODF4Q2M2E3 PVT1_1.1-201ENST00000615125 194 ntBASIC19.7■□□□□ 0.74
ODF4Q2M2E3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ODF4Q2M2E3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.69■□□□□ 0.74
ODF4Q2M2E3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 MIR4281-201ENST00000580852 62 ntBASIC19.68■□□□□ 0.74
ODF4Q2M2E3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 AF131216.4-201ENST00000638924 1588 ntBASIC19.68■□□□□ 0.74
ODF4Q2M2E3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ODF4Q2M2E3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.67■□□□□ 0.74
ODF4Q2M2E3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ODF4Q2M2E3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms