Protein–RNA interactions for Protein: Q9UJ68

MSRA, Mitochondrial peptide methionine sulfoxide reductase, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRAQ9UJ68 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
MSRAQ9UJ68 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
MSRAQ9UJ68 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
MSRAQ9UJ68 MIR3665-201ENST00000578708 105 ntBASIC30.76■■■□□ 2.51
MSRAQ9UJ68 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.74■■■□□ 2.51
MSRAQ9UJ68 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.74■■■□□ 2.51
MSRAQ9UJ68 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.73■■■□□ 2.51
MSRAQ9UJ68 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.71■■■□□ 2.51
MSRAQ9UJ68 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
MSRAQ9UJ68 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.69■■■□□ 2.5
MSRAQ9UJ68 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
MSRAQ9UJ68 HLA-V-202ENST00000446817 847 ntBASIC30.68■■■□□ 2.5
MSRAQ9UJ68 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.68■■■□□ 2.5
MSRAQ9UJ68 AL133380.1-201ENST00000506013 324 ntBASIC30.66■■■□□ 2.5
MSRAQ9UJ68 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.65■■■□□ 2.5
MSRAQ9UJ68 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
MSRAQ9UJ68 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.64■■■□□ 2.5
MSRAQ9UJ68 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.63■■■□□ 2.49
MSRAQ9UJ68 AC145285.7-201ENST00000614819 1539 ntBASIC30.63■■■□□ 2.49
MSRAQ9UJ68 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
MSRAQ9UJ68 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.61■■■□□ 2.49
MSRAQ9UJ68 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
MSRAQ9UJ68 AC087741.3-201ENST00000624270 1347 ntBASIC30.58■■■□□ 2.49
MSRAQ9UJ68 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
MSRAQ9UJ68 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.54■■■□□ 2.48
MSRAQ9UJ68 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.54■■■□□ 2.48
MSRAQ9UJ68 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
MSRAQ9UJ68 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
MSRAQ9UJ68 AC044849.2-201ENST00000606596 710 ntBASIC30.52■■■□□ 2.48
MSRAQ9UJ68 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
MSRAQ9UJ68 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
MSRAQ9UJ68 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
MSRAQ9UJ68 DUX4L28-201ENST00000623687 678 ntBASIC30.48■■■□□ 2.47
MSRAQ9UJ68 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
MSRAQ9UJ68 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
MSRAQ9UJ68 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
MSRAQ9UJ68 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.44■■■□□ 2.46
MSRAQ9UJ68 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.43■■■□□ 2.46
MSRAQ9UJ68 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.43■■■□□ 2.46
MSRAQ9UJ68 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
MSRAQ9UJ68 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.41■■■□□ 2.46
MSRAQ9UJ68 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
MSRAQ9UJ68 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
MSRAQ9UJ68 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
MSRAQ9UJ68 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.38■■■□□ 2.45
MSRAQ9UJ68 MIR762-201ENST00000390236 83 ntBASIC30.36■■■□□ 2.45
MSRAQ9UJ68 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.36■■■□□ 2.45
MSRAQ9UJ68 AC005559.1-201ENST00000589661 871 ntBASIC30.35■■■□□ 2.45
MSRAQ9UJ68 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.34■■■□□ 2.45
MSRAQ9UJ68 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.34■■■□□ 2.45
MSRAQ9UJ68 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.33■■■□□ 2.45
MSRAQ9UJ68 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
MSRAQ9UJ68 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.31■■■□□ 2.44
MSRAQ9UJ68 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MSRAQ9UJ68 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
MSRAQ9UJ68 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.3■■■□□ 2.44
MSRAQ9UJ68 ZNRF2P2-203ENST00000454624 420 ntBASIC30.29■■■□□ 2.44
MSRAQ9UJ68 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.28■■■□□ 2.44
MSRAQ9UJ68 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.26■■■□□ 2.43
MSRAQ9UJ68 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.24■■■□□ 2.43
MSRAQ9UJ68 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
MSRAQ9UJ68 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.23■■■□□ 2.43
MSRAQ9UJ68 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.23■■■□□ 2.43
MSRAQ9UJ68 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
MSRAQ9UJ68 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
MSRAQ9UJ68 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
MSRAQ9UJ68 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
MSRAQ9UJ68 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.2■■■□□ 2.43
MSRAQ9UJ68 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
MSRAQ9UJ68 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.19■■■□□ 2.42
MSRAQ9UJ68 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
MSRAQ9UJ68 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
MSRAQ9UJ68 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
MSRAQ9UJ68 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
MSRAQ9UJ68 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.13■■■□□ 2.41
MSRAQ9UJ68 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
MSRAQ9UJ68 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
MSRAQ9UJ68 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
MSRAQ9UJ68 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
MSRAQ9UJ68 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
MSRAQ9UJ68 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.05■■■□□ 2.4
MSRAQ9UJ68 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
MSRAQ9UJ68 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
MSRAQ9UJ68 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
MSRAQ9UJ68 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
MSRAQ9UJ68 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.02■■■□□ 2.4
MSRAQ9UJ68 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
MSRAQ9UJ68 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
MSRAQ9UJ68 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.99■■■□□ 2.39
MSRAQ9UJ68 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.99■■■□□ 2.39
MSRAQ9UJ68 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
MSRAQ9UJ68 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.96■■■□□ 2.39
MSRAQ9UJ68 MIR4449-201ENST00000578365 66 ntBASIC29.96■■■□□ 2.39
MSRAQ9UJ68 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
MSRAQ9UJ68 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
MSRAQ9UJ68 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.94■■■□□ 2.38
MSRAQ9UJ68 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
MSRAQ9UJ68 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
MSRAQ9UJ68 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
MSRAQ9UJ68 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 271.4 ms