Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.15■■■□□ 2.74
FBXO40Q9UH90 CAHM-201ENST00000604200 896 ntBASIC32.15■■■□□ 2.74
FBXO40Q9UH90 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.15■■■□□ 2.74
FBXO40Q9UH90 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
FBXO40Q9UH90 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
FBXO40Q9UH90 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
FBXO40Q9UH90 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.14■■■□□ 2.74
FBXO40Q9UH90 AL133380.1-201ENST00000506013 324 ntBASIC32.14■■■□□ 2.74
FBXO40Q9UH90 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
FBXO40Q9UH90 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
FBXO40Q9UH90 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
FBXO40Q9UH90 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.12■■■□□ 2.73
FBXO40Q9UH90 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.11■■■□□ 2.73
FBXO40Q9UH90 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
FBXO40Q9UH90 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.07■■■□□ 2.72
FBXO40Q9UH90 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
FBXO40Q9UH90 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
FBXO40Q9UH90 AL391121.1-201ENST00000607967 1349 ntBASIC32.06■■■□□ 2.72
FBXO40Q9UH90 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.04■■■□□ 2.72
FBXO40Q9UH90 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.04■■■□□ 2.72
FBXO40Q9UH90 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
FBXO40Q9UH90 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
FBXO40Q9UH90 RPS2P35-201ENST00000443417 897 ntBASIC32■■■□□ 2.71
FBXO40Q9UH90 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
FBXO40Q9UH90 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.99■■■□□ 2.71
FBXO40Q9UH90 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
FBXO40Q9UH90 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
FBXO40Q9UH90 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
FBXO40Q9UH90 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
FBXO40Q9UH90 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
FBXO40Q9UH90 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
FBXO40Q9UH90 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.92■■■□□ 2.7
FBXO40Q9UH90 AP006261.1-201ENST00000584783 668 ntBASIC31.89■■■□□ 2.7
FBXO40Q9UH90 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
FBXO40Q9UH90 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
FBXO40Q9UH90 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
FBXO40Q9UH90 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.87■■■□□ 2.69
FBXO40Q9UH90 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
FBXO40Q9UH90 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.86■■■□□ 2.69
FBXO40Q9UH90 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
FBXO40Q9UH90 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.83■■■□□ 2.69
FBXO40Q9UH90 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
FBXO40Q9UH90 AL162393.1-201ENST00000437852 946 ntBASIC31.81■■■□□ 2.68
FBXO40Q9UH90 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.81■■■□□ 2.68
FBXO40Q9UH90 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
FBXO40Q9UH90 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
FBXO40Q9UH90 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.77■■■□□ 2.68
FBXO40Q9UH90 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.74■■■□□ 2.67
FBXO40Q9UH90 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
FBXO40Q9UH90 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.7■■■□□ 2.67
FBXO40Q9UH90 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
FBXO40Q9UH90 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.7■■■□□ 2.67
FBXO40Q9UH90 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
FBXO40Q9UH90 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
FBXO40Q9UH90 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
FBXO40Q9UH90 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
FBXO40Q9UH90 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.69■■■□□ 2.66
FBXO40Q9UH90 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
FBXO40Q9UH90 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
FBXO40Q9UH90 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.66■■■□□ 2.66
FBXO40Q9UH90 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.65■■■□□ 2.66
FBXO40Q9UH90 MIR3665-201ENST00000578708 105 ntBASIC31.65■■■□□ 2.66
FBXO40Q9UH90 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
FBXO40Q9UH90 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
FBXO40Q9UH90 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.61■■■□□ 2.65
FBXO40Q9UH90 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.6■■■□□ 2.65
FBXO40Q9UH90 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.58■■■□□ 2.65
FBXO40Q9UH90 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
FBXO40Q9UH90 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
FBXO40Q9UH90 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
FBXO40Q9UH90 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
FBXO40Q9UH90 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
FBXO40Q9UH90 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
FBXO40Q9UH90 MIR762-201ENST00000390236 83 ntBASIC31.54■■■□□ 2.64
FBXO40Q9UH90 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.53■■■□□ 2.64
FBXO40Q9UH90 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
FBXO40Q9UH90 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
FBXO40Q9UH90 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
FBXO40Q9UH90 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
FBXO40Q9UH90 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
FBXO40Q9UH90 WASH5P-204ENST00000632292 975 ntBASIC31.49■■■□□ 2.63
FBXO40Q9UH90 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31.48■■■□□ 2.63
FBXO40Q9UH90 DUX4L28-201ENST00000623687 678 ntBASIC31.48■■■□□ 2.63
FBXO40Q9UH90 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.47■■■□□ 2.63
FBXO40Q9UH90 AC005559.1-201ENST00000589661 871 ntBASIC31.46■■■□□ 2.63
FBXO40Q9UH90 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.46■■■□□ 2.63
FBXO40Q9UH90 AC087741.3-201ENST00000624270 1347 ntBASIC31.45■■■□□ 2.62
FBXO40Q9UH90 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
FBXO40Q9UH90 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
FBXO40Q9UH90 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.42■■■□□ 2.62
FBXO40Q9UH90 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.42■■■□□ 2.62
FBXO40Q9UH90 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
FBXO40Q9UH90 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
FBXO40Q9UH90 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
FBXO40Q9UH90 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
FBXO40Q9UH90 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.38■■■□□ 2.61
FBXO40Q9UH90 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
FBXO40Q9UH90 AC044849.2-201ENST00000606596 710 ntBASIC31.36■■■□□ 2.61
FBXO40Q9UH90 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.35■■■□□ 2.61
FBXO40Q9UH90 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms